| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2622 |
|---|
| Symbol | |
|---|
| ID | 4006662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 462463 |
|---|
| End bp | 463785 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637950085 |
|---|
| Product | xylose isomerase |
|---|
| Protein accession | YP_552721 |
|---|
| Protein GI | 91777513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2115] Xylose isomerase |
|---|
| TIGRFAM ID | [TIGR02630] xylose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.527813 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTATT TCGAACACAT TCCCGAGATC CGCTACGAAG GCCCACAATC GGACAACCCG
CTTGCCTATC GCCACTACGA TAAAAGTAAA AAGGTACTCG GTAAAACCCT CGAAGAACAT
CTGCGCATTG CGGTGTGCTA TTGGCACACA TTCGTTTGGC CGGGCGTGGA TATTTTCGGG
CAGGGAACGT TTCGGCGTCC CTGGCAGCAA GCCGGCGATG CAATGGAGCG GGCACGGCAG
AAGGCGGACT CCGCATTCGA GTTCTTCTCG AAGCTCGGTA CGCCGTACTA CACGTTTCAC
GATACCGACG TCTCGCCCGA AGGTTCGAGC CTGAAGGAAT ACAGCGAAAA CTTCCTGCGC
ATTACGGATT ATCTGGCACG CAAGCAGGAG GACACCGGCA TCAAGCTGCT GTGGGGCACG
GCCAATCTGT TTTCGCATCC CCGTTACGCG GCCGGCGCGG CCACCAGCCC CGATCCGGAG
GTGTTCGCGT TTGCGGCGAC GCAGGTGCGC CACGCGCTCG ATGCGACCCA GCGGTTAGGC
GGCGACAACT ACGTCCTGTG GGGCGGCCGC GAGGGTTACG ACACGTTGCT CAATACCGAC
CTCATGCGTG AGCGCGATCA ACTTGCCCGT TTTCTGCATA TGGTCGTGGA CCATGCGCAC
AAGATCGGCT TTAAAGGCTC GCTGCTGATC GAACCCAAGC CGCAGGAACC GACCAAGCAT
CAATACGATT ACGATGTCGC AACCGTACAC GGTTTCCTGC TGCAACACGG GTTGGAGAAA
GAGATCCGGG TAAACATCGA GGCCAATCAC GCAACGCTCG CGGGTCACTC GTTTCATCAC
GAGATCGCCA CGGCCTATGC GCTGGGTATT TTCGGCAGCG TCGACGCGAA TCGCGGCGAC
CCGCAAAACG GCTGGGATAC CGACCAGTTC CCAAATAGTG TGGAAGAGTT GACGCTTGCC
TTCTACGAAA TTCTCAAACA CGGCGGCTTC ACCACGGGCG GCATGAACTT CGACTCGAAA
GTGCGGCGCC AGAGTGTCGA TCCGGAAGAT CTGTTCTACG GCCACATCGG TGCAATCGAT
AACCTCGCGC TCGCCGTCGA GCGCGCGGCG GTGCTGATCG AAAACGACCG CCTCGATCAA
TTCAAGCGTC AACGCTATGC GGGTTGGGAC GCAGACTTTG GACGCAAGAT CCTGTCCGGC
GACTATTCGC TCTCCACGCT GGCAACGGAT GCGCTCGCGC GCGGTCTGAA CCCGCAGCAT
GCAAGCGGCC ACCAGGAGCT CATGGAAAAC ATCGTGAATC AGGCTATTTA CAGCGGACGC
TGA
|
|---|
| Protein sequence | MSYFEHIPEI RYEGPQSDNP LAYRHYDKSK KVLGKTLEEH LRIAVCYWHT FVWPGVDIFG
QGTFRRPWQQ AGDAMERARQ KADSAFEFFS KLGTPYYTFH DTDVSPEGSS LKEYSENFLR
ITDYLARKQE DTGIKLLWGT ANLFSHPRYA AGAATSPDPE VFAFAATQVR HALDATQRLG
GDNYVLWGGR EGYDTLLNTD LMRERDQLAR FLHMVVDHAH KIGFKGSLLI EPKPQEPTKH
QYDYDVATVH GFLLQHGLEK EIRVNIEANH ATLAGHSFHH EIATAYALGI FGSVDANRGD
PQNGWDTDQF PNSVEELTLA FYEILKHGGF TTGGMNFDSK VRRQSVDPED LFYGHIGAID
NLALAVERAA VLIENDRLDQ FKRQRYAGWD ADFGRKILSG DYSLSTLATD ALARGLNPQH
ASGHQELMEN IVNQAIYSGR
|
|---|
| |