Gene Bxe_B2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2607 
Symbol 
ID4006891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp483410 
End bp484501 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID637950100 
ProductOmpC family outer membrane porin 
Protein accessionYP_552736 
Protein GI91777528 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.782547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA AATACAACAA GATCCGACAG GAGACGTCAG TGAAAAAACA ATATGCGGTG 
GCCGCTTTGG CCGTGGTGAG TTGCGCGGGT GCGCATGCTC AGGCATCGGT CACGTTATAC
GGTGTGATCG ACACCAACCT CGAATTTCTC AACCATGCGG GCGCCAGCGG CGGCTCGCTG
GTTCGCGAGA ATTCCGGCGG CCTGAGCAAC TCGCGCTTCG GCTTTCGCGG CGCCGAAGAT
CTCGGCGGCG GCAATAAAGC GTTCTTCATT CTCGAAGCGG GCTTCAACGG CAACGACGGC
ACCAATGCGA GTGCCGGCGT GCTGTTCAAT CGCACGGCGG CGGTGGGGCT TTCCAACGCG
TACGGTGCGC TGTCGGCGGG CTTGCAGTAC ACGGCGATGT ACGACACGCT GATCAAATAC
GACCCGATGG TGTTCGGCCA GCAATACACG TGGATGCCGA CCACCGGTTC CGTGGATGGC
TTTTCGTTCA AGGCGCGCGT GAACAACTCG GTGAAGTACG TGGGCCGCTT CGGCGGTTTG
ACGGCGACGG CGGATTACAG CTTCGGTGGC TCGGCGGATT CGTTCCAGAG CAGCGCCGCG
TACGGCGGCG CGCTCGACTA CGATACCGGC AGCTTCGCCG CGGCCGTGGC CTACGACTAC
CGCAACGGCG CGATCAACTC GACCGGCATG TGGACCAAAT CGCGCAACTG GAGCGCCTCG
GCGCGCGAGC AGCTCGGCAA CGTCACGCTC ATGGGCGGCT ATGAGCACTA TTTGTACGAC
CCGACCAAGG GCAAGTCGGT GTCGTCGGCG TTGTGGTTCG GCGGTGTGCG TTATCTGATC
GCGCCGGATT TCCGCGTGAC GGCGGCCGCG TACTACCAGA GCAACAAGGC GGACAACGTA
TCGAACTCGT TGATGGGCGT GCTGGGAGCG GACTATATTC TGTCGAAGCG GACCGATGTG
TACGCAACCG TCGCGTATGC GGCGGCCACG CACTACGCCA ACGACGAATA CACGCCCGTC
GGTTTGACGA GCGATACCGC GTTCGGTCCG AACCAGACCG GCGTGACGCT CGGTATCCGG
CATCGGTTCT GA
 
Protein sequence
MNAKYNKIRQ ETSVKKQYAV AALAVVSCAG AHAQASVTLY GVIDTNLEFL NHAGASGGSL 
VRENSGGLSN SRFGFRGAED LGGGNKAFFI LEAGFNGNDG TNASAGVLFN RTAAVGLSNA
YGALSAGLQY TAMYDTLIKY DPMVFGQQYT WMPTTGSVDG FSFKARVNNS VKYVGRFGGL
TATADYSFGG SADSFQSSAA YGGALDYDTG SFAAAVAYDY RNGAINSTGM WTKSRNWSAS
AREQLGNVTL MGGYEHYLYD PTKGKSVSSA LWFGGVRYLI APDFRVTAAA YYQSNKADNV
SNSLMGVLGA DYILSKRTDV YATVAYAAAT HYANDEYTPV GLTSDTAFGP NQTGVTLGIR
HRF