Gene Bxe_B2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2596 
Symbol 
ID4006902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp495392 
End bp497317 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content65% 
IMG OID637950111 
Producthypothetical protein 
Protein accessionYP_552747 
Protein GI91777539 
COG category[S] Function unknown 
COG ID[COG3519] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03359] type VI secretion protein, VC_A0110 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000554833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGTA TGGACCCGGA ATTACCAGCG TATTACCAGG GCGAACTGCA CTACATCCAC 
GAACTCTTCC AGGAGTTTGC ACAGCAGCAC CCAAAGATTG CCCGCAGGCT CGGCGCGCAG
GCAGGTGAAG CGGGCGACCC TTATGTCGAG CGCCTGCTCC AGTCCTTTGC GATAACGGCG
GCGCGCTCGC AGATGCGTAT CGATCGTTTT TCGCTGGACA TCCCGTTGCG CAAACTGGAT
GGCGTCGATC TGAACCTGAC CGCGCCGCTG CCGTCGCTGG GCGTGGCGCG GTTCTATCCC
GATGCAGAGG CACCGCATAG TCCGCAGGGC CTGACGTTGG CGCGTGGCAC GAGGCTCACG
GTACACGCAG CCGAAGATGC AACGGAGTGC GCGTTCCTCA CGAGCCAACC GCTCAGGCTC
TGGCCGGTTG CTATCACGCG CGCGAAGCCG ACTGGCATTC CCGCCGACGT TCCGGCGCTC
TACCGCTACG TCCACGACGG CCAGGACGCG TCGCGCGTGC GTGGCGCGCT GCGCCTGAGC
CTTGCTACCG TCAACGGCAT GGCGTTCCGC GGTCTTGAAG CGCTGGACGA ACTGCCCGTG
TACCTGTGCG GTGAGGAGAA GATGGCCTCC CAGCTCTTCG AATTGATCCA TACCAGCGTG
GTCGGCATCG TCATGGGCGT GCCGGGTGAA TTCGAAAAGG GCGGGCTGTA TGGCGCAAAG
CTACCCGGCA TGCCGTACAT GCAAGTGAAG CACGCGGGGC TGGAGCCGCA TGAAAGCCTG
TTGCGTCCGG TCGCCGCGAA GTTCCACGGA CACAGGCTGG TCCATGAATT CTTTGCGCTC
CCATCCAGAT TCGGATTCTT CACGATCACG GGCCTGGCAG CGGGGCTCAA GCATATCGGC
GGCCCTGAGG TCGAAATCGT GCTGCTGCTC GCGCGCGAGG CGGCAACACT GGACCAGCAG
ATCGGCGTGC GGGATTTCGC GCTCTACTGC ACGCCTATCG TCAATCTGTA CCCCGCGACG
AGCGAGCGGC TCACCATGCA CCCGGAGAAG CACGAGCATC CGCTCACGCC CGTGGCGGAG
CGGCCGGGCG ACTACGAGGT TCATTCGGTA GATCGTGTCA GGGGGCAGTT GGAAGAGGAG
TCGGAGAAGT TCCTCTTCCA GCCGCTCGAC GCGGCACTGC CCGACGACAC CCGCCGCAAC
TCGCGGTATT TCACGCTGCG CCGCGAGCAG CAACTGGTGG CGGATAACGA ACGGCGATAT
GACACGCACC GTGAGTTCGT GCGCACGCTC ACTTCGATCA CGCTCCTTGA CGAGAACCGC
AAGCCGGATG AAACAGGCAT GCGGTTTCTT ACCTTCGACG CCTGGTTGAC GAACGGAGAT
CTGCCCTGCG TGCAGCCACG CAACGGCGTG AACGACCTGA CGATGGCGGA TGCGAAGGCG
GTTGAGAGCG TCGGCTTCGT GCGCGGGCCG ACCGCGCCCA GGCCTCCGCT CGCGCTCGGC
GCGCGGGGCG ACGCGGCCTG GGAGCTCGTT CGCCAGTTTC ATCTGGAGCT CGCCGTCTTT
GACGACGAAT TCGACGAGCC CAATCCCGGC GAAGGCCTGC GGCTGATGCT CCGCCCGTAT
CTGGCAGCCG GTGATCCGGC AATGGCCCGT GTTCTCGACA GCCTGGTCGG GGCAACGGCC
GGCGCGGTCA ATGACATGCA TTGCTGGGGC GGCGAGTTGC ATCTCGCGCG CGGCATCGCG
GTCACGCTCA CCTTTGACGA GTCGCGGCTC GACGGCTGGT CGCCCTTTGC GTTCGCGCTG
GTGCTGGAGC GCTACGTCGC GCGGCACGTC TCGGCGCATT GCTTTACGCG CACCACGGTA
CGCACCACGC AGCGTGGCGA GATTTTTACG TTCCCGACGC GTGGCGGCAC GCGCGGTGTC
TTCTGA
 
Protein sequence
MASMDPELPA YYQGELHYIH ELFQEFAQQH PKIARRLGAQ AGEAGDPYVE RLLQSFAITA 
ARSQMRIDRF SLDIPLRKLD GVDLNLTAPL PSLGVARFYP DAEAPHSPQG LTLARGTRLT
VHAAEDATEC AFLTSQPLRL WPVAITRAKP TGIPADVPAL YRYVHDGQDA SRVRGALRLS
LATVNGMAFR GLEALDELPV YLCGEEKMAS QLFELIHTSV VGIVMGVPGE FEKGGLYGAK
LPGMPYMQVK HAGLEPHESL LRPVAAKFHG HRLVHEFFAL PSRFGFFTIT GLAAGLKHIG
GPEVEIVLLL AREAATLDQQ IGVRDFALYC TPIVNLYPAT SERLTMHPEK HEHPLTPVAE
RPGDYEVHSV DRVRGQLEEE SEKFLFQPLD AALPDDTRRN SRYFTLRREQ QLVADNERRY
DTHREFVRTL TSITLLDENR KPDETGMRFL TFDAWLTNGD LPCVQPRNGV NDLTMADAKA
VESVGFVRGP TAPRPPLALG ARGDAAWELV RQFHLELAVF DDEFDEPNPG EGLRLMLRPY
LAAGDPAMAR VLDSLVGATA GAVNDMHCWG GELHLARGIA VTLTFDESRL DGWSPFAFAL
VLERYVARHV SAHCFTRTTV RTTQRGEIFT FPTRGGTRGV F