Gene Bxe_B2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2564 
Symbol 
ID4006939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp549342 
End bp550409 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID637950148 
Productbranched chain amino acid ABC transporter inner membrane protein 
Protein accessionYP_552779 
Protein GI91777571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA CCTCGAAGCC CATCGCGCAA AGTGCTTCTT CTGTAAGGGC CCAGCCGGGC 
CTGAAGCATT CGCTGCATCG CTATCGCTTC CTGCTGCTTG CGCTGCTAGT GGTGTGCGTA
TTGCCGCTGA CACTGCGCTC CGGATCGCTG GCCACGGAAG TGCTGGTGTT CGCGCTCGCC
GCGCTCGGCT GCAATCTGCT GCTCGGCTAC ACAGGGCTGC TTTCATTCGG GCAGGGCATT
TTCTTCGGAC TAGGCAGCTA TTGCGCGGGA CTGGTTCTCA CCAGGACGGC GTTGCCGGTG
CCCGCGGCGT TGTTTGCAGC GGCGATAATC GGCGCGGCGG CTGCGGCGCT CGTCGGCTGG
TTTTCGATTC GTCAGCGTGG CACGTACTTC GTCATGCTGA CACTCGCGTT CGGGCAACTG
TTCTATTTCC TCGCGTACAC CACGCCCGAT CTGACCGGCG GTGACAATGG GTTGCTCGAC
ATTCCGCGCC CGGCGCTCGG ACTGTTCGGC AAAACGATCG TGCCGTTGAC CTCGCCGTGG
CAATACTACG GCTTCGTCGC CGTGCTGTTT CTCGTGGTGT TCTGGCTGCT GATGCGCGTA
TCGCACTCAG TATTCGGCCG TACGTTGCTG GCGATTCGCG ACAACGAGGC ACGCGCGGCC
GCGGTCGGCT ACGACGTCAA ACGCTTCAAA CTGATGGCGT TCGTGATCTC CGGCGCGGTC
ACGGGGCTGG CGGGGGCGCT GCATGCGCTG ATGACGGGCA TCGCGCCGCT CTCCAACATC
GACTATCACA CGAGCGAGAT GATCCTCGTG ATGACCGTGA TCGGCGGCAC GGGCAATCTG
TTCGCATCCG TACTAGGCGC CGCGTTCTAC GTGCTGTTCG CCGACTGGCT CTCCACCTTG
TGGCCGCGCT GGCTGTTGCT GCTCGGCATC GTACTGATCG CTGTCAGCCT GTTCATGCAG
CGCGGGCTGT GGGGACTGGG CGAACGCATC TGGCAATCGC TTCGCCGCAG ATCGTCTACC
GACGCAGGCA ACGGCGCAGA CAACGACGCA GACAAGGAGC CCATATGA
 
Protein sequence
MIDTSKPIAQ SASSVRAQPG LKHSLHRYRF LLLALLVVCV LPLTLRSGSL ATEVLVFALA 
ALGCNLLLGY TGLLSFGQGI FFGLGSYCAG LVLTRTALPV PAALFAAAII GAAAAALVGW
FSIRQRGTYF VMLTLAFGQL FYFLAYTTPD LTGGDNGLLD IPRPALGLFG KTIVPLTSPW
QYYGFVAVLF LVVFWLLMRV SHSVFGRTLL AIRDNEARAA AVGYDVKRFK LMAFVISGAV
TGLAGALHAL MTGIAPLSNI DYHTSEMILV MTVIGGTGNL FASVLGAAFY VLFADWLSTL
WPRWLLLLGI VLIAVSLFMQ RGLWGLGERI WQSLRRRSST DAGNGADNDA DKEPI