| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2549 |
|---|
| Symbol | |
|---|
| ID | 4006955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 566943 |
|---|
| End bp | 568373 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637950164 |
|---|
| Product | selenocysteine synthase |
|---|
| Protein accession | YP_552794 |
|---|
| Protein GI | 91777586 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.645361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATG TAAGCGGCTC TGAATTGCGG GCGCTGATGG CGCGCGTGCC GTCGGTGGAA
AAAGTGATGG CGTCGGCCGA GTTCACGCCG CTGATCGGCG AGTACGGCCG CACGCAGGTG
TTGGGCGCGG TGCGCGAGGC GCTCGACAAC TGGCGTACGA GCGCGCAGTC GGGCGCCGCA
TCCGTGAGCG CGCTCGACGC CGCGCAACTG AAGGACTCAG TCGAAGCCAC GCTGCGCCAG
CGCAACCAGT CGCGCCTGCG TAGCGTTTTC AATCTGACCG GCACCGTGCT GCATACCAAC
CTCGGCCGTG CATTGCTGCC TGACGAGGCC GTGCAGTCCG TCATGAAGGC GCTCACGCAA
CCCGCCAACC TCGAATTCGA TCTCGACACC GGCAAGCGCG GCGACCGCGA CGATCTGATC
GACGAGCTCA TCTGCGAATT GACCGGAGCC GAAGCCGCCA CCGTGGTCAA CAACAATGCG
GCCGCGGTCC TGCTTGCGCT GTCCGCGCTG GCGTCGAAGA AAGAAGTGAT CGTGTCGCGC
GGCGAACTGG TCGAGATTGG CGGCGCGTTT CGCATTCCGG ACATCATGAG CCGCGCGGGC
GCGAGGCTGC GCGAAGTCGG CACCACGAAC CGCACGCATC TGAAGGACTA CGAGGAAGCC
ATCGGCCCGC AAACCGCGCT GCTGATGAAA GTCCACGCGA GCAACTACGC GATCAACGGC
TTCACCAAAG AAGTCGGTCT GGATGAAATC GCGCCGCTCG CCCACGCGCG TGGCCTTGCG
GTTGCCGTGG ACCTCGGCAG CGGCACGCTG GTCGATCTGG GCCAATGGGG TTTGCCGCGC
GAGCCGACCG TGCGCGAAAC CGTCAAGGCC GGCGCCGACC TCGTCACGTT CAGTGGCGAC
AAGCTGCTCG GTGGTCCGCA GGCCGGGTTG ATCGTCGGGC GTCGCGATCT GATCGCGAAG
ATCAAGAAGC ATCCGCTCAA GCGCGCGTTG CGCGTCGGCA AACTGACGCT CGCCGCGCTG
GAGCCTGTGC TGCAGCTTTA TCGCGCGCCC GAAAAGCTCA CGGAGCGGCT CACCACGCTG
CGCTTGCTGA CCCGTCCCGC CGACGATATC CGGCTCGCTG CCGAGCGCGT ACAGCCCGCT
TTGCAGCGGG CGCTCGGCGA ACGCTATGCG GTCGCGGCGG AGCCGATGTT CAGTCAGATC
GGCAGCGGAG CCTTACCCGT TGATGTGCTG CCGAGCTACG GCCTTGTCGT CAGAACGGCG
GACGGCAAAC GCGGCGGCCG CCAATTGCTC GCGCTCGAAA AGCTGCTGCG CGAGATGGCG
CGGCCCGTGA TCGGCCGTAT CGCGGACGAC GCATTGCGCC TCGACCTGCG CTGTCTCGAA
GCCGCCGACG AAGCGCAACT GATCGGGCAG CTGGAAGGCG TGCGCGCATG A
|
|---|
| Protein sequence | MSDVSGSELR ALMARVPSVE KVMASAEFTP LIGEYGRTQV LGAVREALDN WRTSAQSGAA
SVSALDAAQL KDSVEATLRQ RNQSRLRSVF NLTGTVLHTN LGRALLPDEA VQSVMKALTQ
PANLEFDLDT GKRGDRDDLI DELICELTGA EAATVVNNNA AAVLLALSAL ASKKEVIVSR
GELVEIGGAF RIPDIMSRAG ARLREVGTTN RTHLKDYEEA IGPQTALLMK VHASNYAING
FTKEVGLDEI APLAHARGLA VAVDLGSGTL VDLGQWGLPR EPTVRETVKA GADLVTFSGD
KLLGGPQAGL IVGRRDLIAK IKKHPLKRAL RVGKLTLAAL EPVLQLYRAP EKLTERLTTL
RLLTRPADDI RLAAERVQPA LQRALGERYA VAAEPMFSQI GSGALPVDVL PSYGLVVRTA
DGKRGGRQLL ALEKLLREMA RPVIGRIADD ALRLDLRCLE AADEAQLIGQ LEGVRA
|
|---|
| |