Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2540 |
Symbol | |
ID | 4006964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 578579 |
End bp | 579673 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637950172 |
Product | ABC spermidine/putrescine transporter, ATPase subunit |
Protein accession | YP_552802 |
Protein GI | 91777594 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.534677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGA TCGAACTGAA GCAGGTCTCG CGGCGCTACG GTGCAGTGCA AGCGCTCGCA CCGCTCGATT TCAGCGTGAA GCAGGGCGAG TTCGTCACGC TGCTCGGACC GAGCGGGTCG GGCAAGACGA CGCTGCTCAA CGTGATCGCG GGCATGGTGA ATCCGTCGTC CGGGCAGATC TTCGTGCGCG GCGTCGATAT CACGAAAGCG CCGCCGAGCG CGCGCGGCCT GGGCATGGTG TTCCAGAACT ACGCGTTGAT GCCGCACATG ACGGTGTTCG ACAATATTGC GTTTCCACTG CGCGTGCGCA AGATGCCGAA GGACGAGATT GCCCGCAAGG TGAAAGACGT GCTCGACATG GTGCGGCTGC CCGACATCGC GCAGCGCAAA CCGAAGGAGT TGTCGGGTGG CCAGCAGCAG CGCGTGTCGC TCGCGCGTTG CATCGTCTAC AACCCGGCGC TGATCCTGCT CGACGAGCCG CTCGGCGCAC TCGACAAGAA ACTGCGGGAG CAGATGCAGT TGGAGATCCG CCGGTTGCAT GCTGAGCTCG GCATCACGAT GCTCAACGTT ACGCACGACC AGGACGAAGC GCTGTCGATG TCCGATCGCA TCGTGCTGAT GAACGAGGGG CGCGTGGAAC AGATCGCGAC TCCCGACGAA CTCTATCGCT CACCGCGCAC GGCGTTCGCG GCAAGTTTCA TCGGGACCGC CAATCTGATC TCGGGCACGG TGGAGCACCA TGCGGGCGAA CGGGCGCTCG TCTCGACCCC GCTTGGCATG CTGCGCGCCG CGGCGACCGC GTGCACGGCG TCGCGAGGCG AGTCCGTCAC GCTGCTGGTG CGTCCGGAGA GCGTGCGCAT GGGGCCCGCA TCCGATTCGC CGACCGGCGA CGGCGCGGAC GGTTTGCGCC ATGCGGGCAC GCTGGAAGAC TCGATCATGC TCGGCAGCGT GGTGCGTCAT CACGTGCGCC TTACGGGCGG CATGCAGATG GTGGTGCAGC AGCAGGACAG CCGCCGGCGC CCGGCGCCCG AGCGCGGCGC ACCGGTGCTG CTCGATTGGG CGCCGGAAGA TTGCCAGATG ATCCTGCAGG ACTGA
|
Protein sequence | MNMIELKQVS RRYGAVQALA PLDFSVKQGE FVTLLGPSGS GKTTLLNVIA GMVNPSSGQI FVRGVDITKA PPSARGLGMV FQNYALMPHM TVFDNIAFPL RVRKMPKDEI ARKVKDVLDM VRLPDIAQRK PKELSGGQQQ RVSLARCIVY NPALILLDEP LGALDKKLRE QMQLEIRRLH AELGITMLNV THDQDEALSM SDRIVLMNEG RVEQIATPDE LYRSPRTAFA ASFIGTANLI SGTVEHHAGE RALVSTPLGM LRAAATACTA SRGESVTLLV RPESVRMGPA SDSPTGDGAD GLRHAGTLED SIMLGSVVRH HVRLTGGMQM VVQQQDSRRR PAPERGAPVL LDWAPEDCQM ILQD
|
| |