| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2521 |
|---|
| Symbol | |
|---|
| ID | 4006983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 599823 |
|---|
| End bp | 600455 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637950190 |
|---|
| Product | 3-isopropylmalate dehydratase, small subunit |
|---|
| Protein accession | YP_552820 |
|---|
| Protein GI | 91777612 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0949356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGC TCGTGTGTCA TGAAGGTCTT GTCGTTCCGC TCGATCGGGA CAACGTCGAT
ACGGACGCGA TCATCCCGAA GCAGTTCATG AAGTCCATCG CGCGAACCGG TTTCGGTCCC
TATCTGTTCG ACGAATGGCG CTACCGCGAC CCCGGCCATT ACGGCAAGCC GGCGGCCGAA
CGCACGCCCG AGCCGGGCTT CGCGCTGAAC CAGCAGCGCT ACGCGGGCGC CTCAGTGCTG
CTCACGCGGC GCAATTTCGG CTGCGGCAGT TCGCGCGAGC ACGCGCCGTG GGCGCTGCAT
CAATTCGGCT TCCGGGTGCT CGTGGCCGAG AGCTTCGCCG ACATCTTCTT CAACAACTGC
TGCAAGAACG GGCTGCTGCC GGTACGGCTC GATGCCGCAC TGATCGGCCG GCTGATGGAA
ACGGTGGAGG CTGCGCACGG CTACCGTCTG CGCGTGGATC TGGCTGCGCA GACACTCACT
GCGCCGGACG GCGAGTGCTG GCGCTTCGAC ATCCCGCCCG CGCTGAGGAC GCTGCTGCTC
GAAGGCCTCG ACGAAACCGG CGCGACGCTT GCATTCGCCG ACGCGATCCG TGCGTTCGAG
GCCGTTCAAC TCGAACGTTC GCCGTGGCTC TAG
|
|---|
| Protein sequence | MEPLVCHEGL VVPLDRDNVD TDAIIPKQFM KSIARTGFGP YLFDEWRYRD PGHYGKPAAE
RTPEPGFALN QQRYAGASVL LTRRNFGCGS SREHAPWALH QFGFRVLVAE SFADIFFNNC
CKNGLLPVRL DAALIGRLME TVEAAHGYRL RVDLAAQTLT APDGECWRFD IPPALRTLLL
EGLDETGATL AFADAIRAFE AVQLERSPWL
|
|---|
| |