| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2246 |
|---|
| Symbol | |
|---|
| ID | 4007258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 896098 |
|---|
| End bp | 896766 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637950460 |
|---|
| Product | amino acid efflux pump, RhtB family protein |
|---|
| Protein accession | YP_553090 |
|---|
| Protein GI | 91777882 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.747875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCG GGCCGCCGTC TTGCCGGGCG ATGGATCTCC AACATCCATT CACGGCGCGA
GCCGTCATGT TCATCACCGC CTGGCTGTTC TTTCTGCTCT GCTGCTTCGC GATCAATCTC
GTGCCCGGGC CCAATAATCT GCTGTCGATC AATGTGGCTG CGCTTCATGG TTTCATCATT
GCGTTCGTCG GCGGCACGGG CCACCTGGTC GCATTCGCCG CGATGCTCGT GCTTGCCGCA
ACCGGCCTTG CAGTTGTGCT GCACGCGTCC GAGTGGTTCT TTCTTGCGAT CAAGCTGGCC
GGCGCGGCCT ATCTGATCTG GCTCGCCATC CAGTTGTGGC GCAGCGACGC GCCCACGTTC
GATACGACCC AGCAGCACGA TGTCTCGCTT GCGCGGATCG CCCGGCGGGA ATTCCTCGTG
GCCGCCGGCA ATCCGAAGGC GATTCTGGTA TTCACCGCGT TCCTGCCGCA GTTCGTCAAT
ATCGCCAAAC CGATGCTGCC GCAATTCGCC GTGCTGGGCA TCAGTTTTCT GGTGCTGGAG
TGGTTTGCTA TCGCGCTGTA TTCGCGGGCG GGGATGTATC TCGGGAAATG GCTGGCGCGC
GCACGGTTGC GGCGGTGGTT TAATCGCTGC TGTGGGGGTT TTCTGGCGGC GATTGGGGTG
GGGTTTTGA
|
|---|
| Protein sequence | MSRGPPSCRA MDLQHPFTAR AVMFITAWLF FLLCCFAINL VPGPNNLLSI NVAALHGFII
AFVGGTGHLV AFAAMLVLAA TGLAVVLHAS EWFFLAIKLA GAAYLIWLAI QLWRSDAPTF
DTTQQHDVSL ARIARREFLV AAGNPKAILV FTAFLPQFVN IAKPMLPQFA VLGISFLVLE
WFAIALYSRA GMYLGKWLAR ARLRRWFNRC CGGFLAAIGV GF
|
|---|
| |