Gene Bxe_B2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2239 
Symbol 
ID4007265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp901186 
End bp902349 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID637950467 
Productdiguanylate cyclase 
Protein accessionYP_553097 
Protein GI91777889 
COG category[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG3159] Uncharacterized protein conserved in bacteria
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGCCGC CAACCCCGCT CGGCCTTCGG GCTGCACCTC ATAACGTGAC GAATCTCGCC 
CAAACGCCGC TTGCCGAGCG TCTTCGCTCG CTTGTCGATA CCGTGCAGCA CAACGAGCGC
ACGCTACGCC GCTTCCAGAG CGTGGAGTTG CGTCTGATCG GCGCGCAGGA TTTCGCTTCC
TTTCTCGACA CGCTATTCGG CCAGCTGCCG CGGGAATTCT CGCTGGCGGG CGTGACGCTC
TGGCTCGACG ACCGCGCGCC GATGCTGCGC GAACTGCTCG AACCGGTCGC CTTGCGCGCA
CTCGATCAGC CCCGCTTGCG AACCTCGCGC GAAGGCGGCC TTGCGGCACA AGGTCTGTGC
GAAGATGGCC GGCCGTGGCT CGGCACGCCG CGCGAACTGG ACGACACCGT GCGGCGCGCT
TTCTTCGGCG ACGCCGAACA GGTGCCGGCC AGTGCGATCC TGCTGCCGCT TGCCTCGGGA
GATACGGTCG GCGGTTATCT CTGGCTCGGC AGTGACGACG CGGCGCGGTT CGCTCAAGGC
ATGGCCACCG ACATACTGGA GCGCTTCGCG AGCATCGTGA CAGCGAGCCT CGACAATGTC
GCGCATCGCG AGCGGCTCAA GCAACTGGGC ATGACCGATT CGTTGACGGG CCTCGCCAAT
CGCCGCTATT TCGACGAGCG GCTGCGCGAG GAAGTCATGC GCGCCGTCCG CTATCGGATG
CCGGTGGCGT GTCTTTTCAT CGATATCGAC AGCTTCAAGC GGATCAACGA CACCTACGGC
CATCAGACCG GCGACCGCGC GCTGGCGGCG GTGGCGGCGT GTGTGCGGCA GCAGGTGCGT
CTGGGCGATA CCGTGGCGCG TTATGGCGGT GAAGAATTTG CCGCGCTGCT GCAAGGCGAC
CGGGCCGACG CGCTCACCGT CGCCGAGCGT GTGCGGCTGG CGGTCGAGCG GCTGGCCTTG
CAGGACGATC ATGGCGAACG CATCGCCTTG ACGGTGTCGA TCGGCGTGGC GGCGCGGATG
GTCAGCGGTA CGCCGACCGA AGCCGCCATG TTGGGCGGCG CGATCATCGA AGAAGCCGAT
CGCGCGATGT ACCAGGCTAA ACGCAACGGC CGTAATCGCA TCGAAGCGCT GGTGAACGCA
AGCGGCGATC ACACGGCTGG TTGA
 
Protein sequence
MGPPTPLGLR AAPHNVTNLA QTPLAERLRS LVDTVQHNER TLRRFQSVEL RLIGAQDFAS 
FLDTLFGQLP REFSLAGVTL WLDDRAPMLR ELLEPVALRA LDQPRLRTSR EGGLAAQGLC
EDGRPWLGTP RELDDTVRRA FFGDAEQVPA SAILLPLASG DTVGGYLWLG SDDAARFAQG
MATDILERFA SIVTASLDNV AHRERLKQLG MTDSLTGLAN RRYFDERLRE EVMRAVRYRM
PVACLFIDID SFKRINDTYG HQTGDRALAA VAACVRQQVR LGDTVARYGG EEFAALLQGD
RADALTVAER VRLAVERLAL QDDHGERIAL TVSIGVAARM VSGTPTEAAM LGGAIIEEAD
RAMYQAKRNG RNRIEALVNA SGDHTAG