Gene Bxe_B2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2167 
SymbolpcaF 
ID4007337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp980474 
End bp981676 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID637950539 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_553169 
Protein GI91777961 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.34173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CATTCCTCTG CGACGCGATT CGCACCCCCA TCGGCCGCTA TGCGGGAGCG 
CTGTCGTCGG TGCGTGCCGA CGACCTCGGC GCCGTGCCGC TCAAAGCGCT GATGGAGCGC
AACAAAGAGG TCGACTGGAA CGCGATCGAC GACGTGATCT ACGGCTGCGC GAACCAGGCT
GGCGAGGACA ACCGTAACGT CGCGCGCATG TCGCTGCTGC TGGCCGGCTT GCCGCAAGGC
GTGCCGGGCA CGACGGTGAA TCGCCTGTGC GGCTCGGGCA TGGACGCGGT CGGCATTGCC
GCGCGCGCCA TCAAATCGGG CGAGGCCGCG TTGATGGTGG CGGGCGGCGT GGAAAGCATG
AGCCGCGCGC CGTTTGTGAC GGGTAAGGCG ACCAGCGCGT TCTCGCGCCA GGCCGAGATT
TACGACACGA CCATCGGCTG GCGCTTCGTC AATCCGTTGA TGAAGAAACT GTACGGTGTC
GATTCGATGC CGGAAACCGG CGAAAACGTC GCCACCGACT ACAACATCAG CCGCGCCGAT
CAGGACGCTT TCGCGTTGCG CAGCCAGCAG AAGGCGGCGC GCGCGCAACG CGACGGCACG
CTCGCGCAGG AGATCGTCGG CGTGACGATC GCGCAGAAGA AGGGCGATCC GGTCACCGTG
TCGCAAGACG AGCATCCGCG CGAGACGAGT CTGGATGCGC TCGCCAAACT CAAGGGCGTG
GTGCGTCCGG ACGGCACGGT CACGGCAGGC AATGCGTCGG GCGTGAACGA CGGCGCAGCG
GCGCTGCTGC TTGCCAACGA GGAAACCGCC AGGCGCTTCG GCCTCACGCC GCGTGCTCGC
GTGCTGGGTA TCGCGACGGC GGGCGTCGCG CCGCGCGTGA TGGGCATCGG CCCGGCGCCC
GCCACGCAGA AACTGCTGGC GCGCCTGAAC ATGAGCCTCG ATCAATTCGA TGTGATCGAA
CTGAACGAGG CGTTTGCTTC GCAAGGTATC GCGGTGCTGC GCGCACTCGG CGTGGCCGAC
GACGACACTC GCGTGAATCC GAACGGCGGC GCGATCGCGC TCGGCCACCC GCTCGGCATG
AGCGGCGCGC GTCTGGTGAC CACCGCGATG TATCAGTTGC ATCGCACGCA GGGCCGTTTT
GCGCTGTGTA CGATGTGTAT CGGCGTCGGC CAGGGCATTG CGATCGCGAT TGAACGGGTG
TGA
 
Protein sequence
MTEAFLCDAI RTPIGRYAGA LSSVRADDLG AVPLKALMER NKEVDWNAID DVIYGCANQA 
GEDNRNVARM SLLLAGLPQG VPGTTVNRLC GSGMDAVGIA ARAIKSGEAA LMVAGGVESM
SRAPFVTGKA TSAFSRQAEI YDTTIGWRFV NPLMKKLYGV DSMPETGENV ATDYNISRAD
QDAFALRSQQ KAARAQRDGT LAQEIVGVTI AQKKGDPVTV SQDEHPRETS LDALAKLKGV
VRPDGTVTAG NASGVNDGAA ALLLANEETA RRFGLTPRAR VLGIATAGVA PRVMGIGPAP
ATQKLLARLN MSLDQFDVIE LNEAFASQGI AVLRALGVAD DDTRVNPNGG AIALGHPLGM
SGARLVTTAM YQLHRTQGRF ALCTMCIGVG QGIAIAIERV