| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2144 |
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| Symbol | |
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| ID | 4007360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1004803 |
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| End bp | 1005795 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637950562 |
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| Product | tripartite tricarboxylate transporter(TTT) family, periplasmic ligand binding protein TctC |
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| Protein accession | YP_553192 |
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| Protein GI | 91777984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.884878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGC CCACGCGCAG AAACGTCGTC ACGCGACGCA CCTGTCTCGC CTCGCTCGCC
GCGCTTGCCG CGAGCGCCTG GATACCGGCG GCGCGGGCGG ACTATCCGGA CAGCCCGATT
CGCATCATCA TCGCGTTTCC CGCGGGCGCG GGCGAGGCCG AAGCGCGCAT CGTCGCAAAG
ACGCTCGGCG CGAAGCTCGG CCAGCCGGTG ATCGTCGAAG CGCATCCGGG CGCCGGCGGC
AATATCGCCG CCGCCTACGT GGCGAAATCG CGCGGCGACG GCTATACGCT GCTGCTGGGC
GTGAGCACGT TCTTCGAGAC CAATCCGATG ATCTATCGCG ACATCGGCTA CCAGCCTGCG
GACCTGCAAC CCGTCAGCAT CATTTCCGAG CAGCCGTTCC TGCTGATCGT GAACGCCTCG
CTGCCCGTTC ACTCTTTGCA GGAACTGATT GCTTATGCCA GGGCGCGGCC GGGCAAGGTC
ACCAATGCCA CGGCCGGTCC CGGCAGTCCG CTCGATCTGA TCGGCAAGGA GTTCATGGTG
CGCGCCGGCG TGCAGATCAT CAACGTGCCG TACAAGGGCG GCGGCGAAGA CGCGATGGCC
GTGCTCGGCG GCTTCTGCGA CATGCTGTTC GGCGGCGTGG CGGATGTGAC GGCGGGGATC
CAGTCCGGCA AGATGCGGCC GATCTGCGTG ACCGGAAGCC GCCGCCTGCC GCATTTTCCC
GACCTGCCGA CGATCGCCGA GGCGGGCTTG CAGGGCTACG ACTTCAGCGT GTGGAACTGC
CTGTCTGCGC CCGCGTCCAC GCCTGCGCCC GTGGTCGAAA AGTTGCACGC CGCGATCGTG
CAGACTATGG CTTCGCCCGA GGTTCAGGCG GGCTTCGACA GAATCGGGTT CTTTCCTGTG
AGCGGTACGG GCGCCGAACT GTCGCGCCGT ATCGCGACCG AAACGGAGGT CTGGCGCGGC
GTTCTGAAGA AGGCGGGGGT TGCTCCGCAG TAG
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| Protein sequence | MDEPTRRNVV TRRTCLASLA ALAASAWIPA ARADYPDSPI RIIIAFPAGA GEAEARIVAK
TLGAKLGQPV IVEAHPGAGG NIAAAYVAKS RGDGYTLLLG VSTFFETNPM IYRDIGYQPA
DLQPVSIISE QPFLLIVNAS LPVHSLQELI AYARARPGKV TNATAGPGSP LDLIGKEFMV
RAGVQIINVP YKGGGEDAMA VLGGFCDMLF GGVADVTAGI QSGKMRPICV TGSRRLPHFP
DLPTIAEAGL QGYDFSVWNC LSAPASTPAP VVEKLHAAIV QTMASPEVQA GFDRIGFFPV
SGTGAELSRR IATETEVWRG VLKKAGVAPQ
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