| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2102 |
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| Symbol | |
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| ID | 4007402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1048552 |
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| End bp | 1050621 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637950604 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_553234 |
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| Protein GI | 91778026 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.762889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCT CATACAACCT TTGGCTGGTG GTCATTTCAT TCGTCGTCGC GACGCTCGCG
TCGTACACCG CGCTCGACCT GACCGGCCGC ATTTTCCTGC TGGCATCGCC GCGTCTGCGG
CATGTCTGGC GCCTGGGCGG CGCCGCGGCA CTCGGCGTCG GCATCTGGTC GATGCACTTC
ATTGCGATGC TCGCCTTTTC GCTGCCGATT CCGCTCGGTT ACGACTTCGC GACAACCGCC
GCTTCGCTCG GACTCGCGAT CGCTGCTTCG TATCTGGCGC TGCACATCAC GACTCGCGAA
AAACTGACCG CGACCCGGCT GCTGGCCGGG GGCGCAGTGA TGGGATGCGG CATTGCCGGC
ATGCACTACG TCGGCATGGC CGCGATGCAG ATGACACCCG GCATCGTGTA TCAGCCGGCA
TGGTTCGCCG GCTCGCTCGC GATCGCGATC GGCGCGTCGA GCGCCGCGCT GTGGCTCGCG
CGCGCGCTCA GCGACGACGA CGCACGCCAC GTGGTGCGCA AGCGTCTGGC CGCGGCACTG
GTAATGGGCG TCGCGATCAG CGGCATGCAT TACGCCGGCA TGGCCGCCGC CGGGTTTTCG
CCCGGTGCCG TGTGCGGTGC GGCCAACGGC GTCAACACCA CGTGGCTCGC AACTTCGGTG
ATCCTGTTCA CCTTTGCCAT TCTGATCGTC ACGCTGATAC TGTCGCGTTT CGATGCGCGC
ACCACCTTTC TGGTCGGCGC GGTGTCGAAC CTGAACGGCC AGATCGTGCG GCTCGCCACG
CTCGACAGTC TGACCGGTCT GCCGAACCGC GCCACGCTGA CGGAGCGCAT CGAACACGCG
ATCCATCGCG CGCAACGGCA GCGCTCGCTG TGCGCGGTCC TCTTCATGGA CCTCGACGGC
TTCAAGACGA TCAATGATTC GCTCGGCCAC TCGGCCGGCG ACCAGGTGCT GACCGCGTTC
GCGCAGCGCC TGCTGCTGTG CGTGCGCGCG AGCGACACCG TGGCGCGGCT GGGCGGCGAC
GAATTCGTGG TGCTGGCCGA AGACCTCGGT TCGCGCGAAG ACGCCGGCGC GCTGGCGGAG
GGTGTGCTCG AGCGGATGCG CATGGGCATG TGGACCGACT CCCAGCCGCT ACAGGTCATG
CCGAGCATCG GCATCGCACT CTTTCCGCAC GACGGCGACA CGGTCGACAG CCTGCTGAAA
AACGCGGACG CGGCCATGTA CGAAGCCAAA CGCGCGGGCC GCAGCACCTA TCGCTTCTTC
GAGCGCAGCA TGAACGAGGC GGCCATGCGC ACGCTGCAGA TTCAGAACGC GCTGCACGAC
GCGCTCGCCG CCGGCCAGTT TTCGCTGCAC TTCCAGCCGA AGTTTCACGG CGGCGGCGAA
TCGCTGGCCG GCGCCGAAGC GCTGATCCGT CTGCATCATC CGCAACTCGG CGATCTGGCG
CCGCTCGAAT TCATTCCGAT TGCCGAGCGC TCGGGACAGA TCGTGCAGAT CGGCTACTGG
GTCGTGCGCG AAACGTGCCG GCAGATTCGC CGCTGGATCT CGCAAGGCCT GCCTTCGATG
AAAGTAGCGG TCAACCTGTC GCCGCGCCAG ATGCTGCAGC CGAACCTCGT CGCGAGCATG
CTCGAGATCG TCCAGGCCGA AGGCGTGCAA TGCGAGCAGA TCATGTTCGA GATCACCGAA
ACCGTGGCGA TGCAGGATGC CCCCAAAACC ATCGAGATGA TCCGCCAGTT CCAGGCGTGC
GGCTTCGAGA TCGCGATCGA CGACTTCGGC ACCGGCTATT CGAGCCTCGC CTATCTGCAA
CGCTTTCGCG TAAAGCAACT GAAGATCGAC CGCTTCTTCA CCAACGGTCT CGACGTGCAT
GGCCCGGAAG GCAGCGCGAT CGTATCGGCG ATCATCGCGC TCGCGCATTC GCTGGAAATG
GACGTGGTGG CCGAGGGTGT CGAAACGGAA TCGCAACTCG ACATGCTCAG AACCATGATG
TGCGATGAAA TGCAGGGGTT CCTGCTCGGC AAGCCGCTCA GCGCCGACGA CTTCGGCAAT
CTGCTGCGAG AGAGAATGGT AGCTGCGTGA
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| Protein sequence | MQSSYNLWLV VISFVVATLA SYTALDLTGR IFLLASPRLR HVWRLGGAAA LGVGIWSMHF
IAMLAFSLPI PLGYDFATTA ASLGLAIAAS YLALHITTRE KLTATRLLAG GAVMGCGIAG
MHYVGMAAMQ MTPGIVYQPA WFAGSLAIAI GASSAALWLA RALSDDDARH VVRKRLAAAL
VMGVAISGMH YAGMAAAGFS PGAVCGAANG VNTTWLATSV ILFTFAILIV TLILSRFDAR
TTFLVGAVSN LNGQIVRLAT LDSLTGLPNR ATLTERIEHA IHRAQRQRSL CAVLFMDLDG
FKTINDSLGH SAGDQVLTAF AQRLLLCVRA SDTVARLGGD EFVVLAEDLG SREDAGALAE
GVLERMRMGM WTDSQPLQVM PSIGIALFPH DGDTVDSLLK NADAAMYEAK RAGRSTYRFF
ERSMNEAAMR TLQIQNALHD ALAAGQFSLH FQPKFHGGGE SLAGAEALIR LHHPQLGDLA
PLEFIPIAER SGQIVQIGYW VVRETCRQIR RWISQGLPSM KVAVNLSPRQ MLQPNLVASM
LEIVQAEGVQ CEQIMFEITE TVAMQDAPKT IEMIRQFQAC GFEIAIDDFG TGYSSLAYLQ
RFRVKQLKID RFFTNGLDVH GPEGSAIVSA IIALAHSLEM DVVAEGVETE SQLDMLRTMM
CDEMQGFLLG KPLSADDFGN LLRERMVAA
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