Gene Bxe_B2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2021 
Symbol 
ID4007483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1144078 
End bp1144641 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID637950684 
Productisochorismatase hydrolase 
Protein accessionYP_553314 
Protein GI91778106 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.128296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0227718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA CCACACTCGA CGCAAAAACC GCACTCATCG TCGTCGATTT GCAGCGAGGC 
ATTGTCGCGC TGCCCACCGC GCATCCCACC GGCGAAGTGG TCGAGCGCTC GGCCGTGCTC
GCGGAGGCGT TTCGCCGCCA CGGCCTACCC GTGGTGCTCG TCAACGTGAC CGGCGGCGCG
CCGGGCCGCA CGCAGGAGGC GCGCAACACG GGCGACTTCC CCGCCGGATT CGCGGATCTG
GTGCCCGAGC TGAACGCGCA ACCGTCCGAT CATCGGGTCA CCAAGCGCAC CTGGGGCGCA
TTCACCAATA CCGATCTCGA AGCGTACCTG CGCGGGCAAG GCGTCACGCA AGTCGTGCTC
GTGGGCGTGG CGACCAGCAT CGGCGTCGAA TCCACCGCGC GCTACGCACA CGAACTCGGC
CTGAACGTGA CGCTCGTGGT CGACGCCATG ACCGATCGCA ATGCGGATGC TCACATCAAC
AGCATCACGC GCATCTTCCC GCGCCTTGGC GAAACCGGCA CGACGCAGGA AGTCCTCGAT
CTGCTCGAAC GCTCGCGCGC ATGA
 
Protein sequence
MALTTLDAKT ALIVVDLQRG IVALPTAHPT GEVVERSAVL AEAFRRHGLP VVLVNVTGGA 
PGRTQEARNT GDFPAGFADL VPELNAQPSD HRVTKRTWGA FTNTDLEAYL RGQGVTQVVL
VGVATSIGVE STARYAHELG LNVTLVVDAM TDRNADAHIN SITRIFPRLG ETGTTQEVLD
LLERSRA