Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2021 |
Symbol | |
ID | 4007483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1144078 |
End bp | 1144641 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637950684 |
Product | isochorismatase hydrolase |
Protein accession | YP_553314 |
Protein GI | 91778106 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.128296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0227718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTCA CCACACTCGA CGCAAAAACC GCACTCATCG TCGTCGATTT GCAGCGAGGC ATTGTCGCGC TGCCCACCGC GCATCCCACC GGCGAAGTGG TCGAGCGCTC GGCCGTGCTC GCGGAGGCGT TTCGCCGCCA CGGCCTACCC GTGGTGCTCG TCAACGTGAC CGGCGGCGCG CCGGGCCGCA CGCAGGAGGC GCGCAACACG GGCGACTTCC CCGCCGGATT CGCGGATCTG GTGCCCGAGC TGAACGCGCA ACCGTCCGAT CATCGGGTCA CCAAGCGCAC CTGGGGCGCA TTCACCAATA CCGATCTCGA AGCGTACCTG CGCGGGCAAG GCGTCACGCA AGTCGTGCTC GTGGGCGTGG CGACCAGCAT CGGCGTCGAA TCCACCGCGC GCTACGCACA CGAACTCGGC CTGAACGTGA CGCTCGTGGT CGACGCCATG ACCGATCGCA ATGCGGATGC TCACATCAAC AGCATCACGC GCATCTTCCC GCGCCTTGGC GAAACCGGCA CGACGCAGGA AGTCCTCGAT CTGCTCGAAC GCTCGCGCGC ATGA
|
Protein sequence | MALTTLDAKT ALIVVDLQRG IVALPTAHPT GEVVERSAVL AEAFRRHGLP VVLVNVTGGA PGRTQEARNT GDFPAGFADL VPELNAQPSD HRVTKRTWGA FTNTDLEAYL RGQGVTQVVL VGVATSIGVE STARYAHELG LNVTLVVDAM TDRNADAHIN SITRIFPRLG ETGTTQEVLD LLERSRA
|
| |