| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2011 |
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| Symbol | |
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| ID | 4007493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1153656 |
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| End bp | 1155149 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637950694 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_553324 |
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| Protein GI | 91778116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0256922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCTACCCCAC CAGACTGGCC GGCGCATTGC TGGCGTTATC GACCGTGTTG
ATGGGCGGCT GCATGGTCGG CCCCGACTAC CATCGGCCGC CCGTCGCCAC GCCCGCCATG
TGGAAGGAAC TGCCCGGCTG GATCGAGGCG CAGCCCGCCG CCGAGGTCCC GAAGGGAGAC
TGGTGGACGG CCTTCAACGA CCCGCTCATC AACGAGCTCG AACCGCTCGT CTCGGTGTCG
AACCAGACCG TGCGCCAGGA CTATGCGAAC TACCAGCAGG CGCTGGCCGA AGTGCGGCTC
GCGCGCAGCG CGCTGTTCCC GACCATCGGC ATTAACGGAT CGGCCACCCG TGAACGTTCG
TCCACGGGCA ATCTGAGCAG CAGCGTGCTG GCCGGCGGCG CGGGCGTGGG CAACTTCCAG
CGCATCAACA ACGCCGGCTC GCTCGAAGCC AACGCGAGCT GGGCGCCCGA CTTGTGGGGT
CTCGTGCGCC GCAACATCGA GCAAAACGCC GCCACCGCGC AGGCCAGCCA GGCCACGCTC
GCCAACGCCA CGCTCTCCGA GCAGATCGCG CTGGCCAACG CGGTGATCGA TCTGCGCGTG
ACGGATGCGA ATATCGACCT GCTCACTCAC ACCGTGGATG CGTTCGAGCA ATCGTTGCGC
GTGGTCGCCG ATCAGGACAA GGCCGGCACC GTGCCGCCTT CCGATCTGGT GAGCGCGCAG
ACGCAACTGG AGTCGGCCCA ATCGAGTCTG ATTGCACTGG GTGTCGCGCG GGCTCAATAC
GTTCATGCGA TCGCCGTGCT GGTCGGCAGG AATCCGGAAG AACTGGACGT ACCCACCAAC
ACCACCCTGC CCACCTTGCC GTCCGTTCCG GTCAGCGTAC CGTCCACGCT ATTGCAGCGC
CGGCCCGATA TTGCCGCCGC CGAGCGCCAG ATGGCCGCAC AGAATGCCGC GATCGGCGTG
GCCGTCGCGG CGTACTACCC GACGATTTCA CTATCGGCGC TGGATGGCTT CACGCAGTCG
CCGTTGGCGG GCCTGCTGCA CATCGCCAAT TATGTCTGGT CGTTGGGCGG CCAGGCGAGC
GAGACGCTTT TCGACGGCGG GCAGCGCAGC GCGCAGGTCG ACGCGGCAAA AGCGTCTTAC
GACGCAGCCC TCGCCAATTA TCGCGGCACG GTTCTGACGG CCTTCCAGGG CGTGGAGAAC
GACCTCGCCG GCTTGCGGAT CCTCGCGCAG CAAGCCGAGG TGCTGGAGCG CGCGGTGCGC
GACGCGACGC GCGGCACCGA GATCGCGCGC AATGAATATC AGGCGGGCAC GGTGGACTTC
ACCACCGTCG CGACCGCGCA AGCCACTCAG TTGAATCTTC AGCAGACGGC CTTGAACGTC
CAGCAGACGC GGCTGCTCGA CGCCGCGTCG CTGATCGGCG ATCTGGGCGG CGGCTGGTCC
GACAGCGAGC TTGGCGACCC CCGGAAGATG GGCCAACGGC AGGTGTCGCC CTAA
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| Protein sequence | MKTIYPTRLA GALLALSTVL MGGCMVGPDY HRPPVATPAM WKELPGWIEA QPAAEVPKGD
WWTAFNDPLI NELEPLVSVS NQTVRQDYAN YQQALAEVRL ARSALFPTIG INGSATRERS
STGNLSSSVL AGGAGVGNFQ RINNAGSLEA NASWAPDLWG LVRRNIEQNA ATAQASQATL
ANATLSEQIA LANAVIDLRV TDANIDLLTH TVDAFEQSLR VVADQDKAGT VPPSDLVSAQ
TQLESAQSSL IALGVARAQY VHAIAVLVGR NPEELDVPTN TTLPTLPSVP VSVPSTLLQR
RPDIAAAERQ MAAQNAAIGV AVAAYYPTIS LSALDGFTQS PLAGLLHIAN YVWSLGGQAS
ETLFDGGQRS AQVDAAKASY DAALANYRGT VLTAFQGVEN DLAGLRILAQ QAEVLERAVR
DATRGTEIAR NEYQAGTVDF TTVATAQATQ LNLQQTALNV QQTRLLDAAS LIGDLGGGWS
DSELGDPRKM GQRQVSP
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