| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2009 |
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| Symbol | |
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| ID | 4007495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1158466 |
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| End bp | 1161591 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637950696 |
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| Product | AcrB/AcrD/AcrF family cation efflux protein |
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| Protein accession | YP_553326 |
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| Protein GI | 91778118 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0269291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0260573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCT CCCGTCTGTT CATCCTCAGA CCCGTGGCGA CGTCGCTGCT GATGGTCGCG
CTCGTGCTCG TCGGGCTGGT CGCGATGCGC TTTCTGCCGG TGTCTTCGCT GCCCGACGTC
GACTATCCCA CTATCCAGGT CCAGACCTTC TATCCCGGCG CGAGCCCGAA CGTGATGGCG
ACCACCGTCA CGGCGCCGCT CGAGGTCCAG CTCGGCGAGA TTCCGGGGCT GCAGCAGATG
GTCTCGTACA GTTCGGAAGG CGCGTCGGTG ATCACGCTGC AGTTCGATCT CTCGCTGAAC
CTGGACATTG CCGAGCAGAA CGTGCAGCAG GCGATCAACG CCGCCAACAG CTTTCTGCCC
ACCGGCCTGC CCGCGCCGCC GACCTACGCG AAGGTGAACC CGGCCGATCA GCCGATCCTC
ACGCTCGCGG TCACGTCGAA GTCCATGTCG CTGACGCAGT TGCAGGACAC CGCCAACAAT
CGTCTCGCCA CCAAGATCTC GGAAGTGCCG GGCGTCGGTC TCGTGACGAC GGCCGGCGGC
AACGTGCCGG CCGTGCGCGT GGAAGCCGAT CCGCAGAAGC TCGCCGCTTA CGGCCTGAAT
CTCGACGATC TGCGCACCCT GCTCGCCAAC GTCAACGTCA GCCAGCCGAA AGGCAATTTC
GACGGTCCGG AGCTCGACTA CACGATCAAC GCCAACGATC AGATCGTGGA CCCGCAAGAC
TATCTGGACT CCGTGATCGC CTATCAGAAC GGTGCGCCGG TGTATCTGCG CGACGTCGCG
CGCGTGAGCC AGGCGGCCCA GGACGTGGAA CGCGGCGCGT GGTACAACCG CACGCCGGCC
ATCGTGCTGA ACGTGCAGCG TCAGCCGGGC GCGAACGTGA TCGCCACCGT GAACCAGATC
ATGAAGCAGT TGCCGGCGCT CGAATCGACG CTGCCCGCCG GCCTGCAGGT CACCGTGGTG
GCGAACACCA CCGGCGTGAT CCGCTCGTCG GTCTCGGACG CCGCGTTCGA ACTGGTGCTC
GCCGTCGTGC TGGTGGTGCT GGTGATCTTC GTGTTCCTGC GCAACGTGCC CGCCACCATC
ATTCCGAGCA TCTCCGTGCC GGTCTCGCTG ATCGGCACGC TCGCGGTGAT GTACCAGCTC
AACTATTCGA TCGACAATCT CTCGCTGATG GCGCTGATCA TCGCAACGGG TTTCGTCGTC
GACGATTCGA TCGTGATGAT CGAGAATATC GTGCGCTATC TGGAGGAAGG CAAGACGCCG
CTCGAAGCCG CGCTCGAAGG CGCCGGCCAG ATCGGCTTCA CAATCCTCTC GCTGACGGTC
TCGCTGATCG CGGTGCTGAT CCCGCTGCTG TTCATGGGCG GCGTGATCGG CCGGCTCTTC
AGCGAATTCG CGATCACGCT CGCGGTGACG ATCGTGATTT CGGCGGTGGT CTCGCTGACC
GTGGTGCCGA TGCTGTGCGC GCGCCTGTTG CGCGCGCAGG CGCAGCGCCA TCCGAGCCGC
TTCGAGCGCT TCAGCGAAGG CCTGTTCGAC AGGACGCTCG CCGCCTACGA GCGTGGTCTG
AACTGGGTGC TCGATCACCA GATGCTGACA CTGGCGGTCG CGCTCATCAC CGTCGCGCTC
ACGGCGATCC TGTACATCGT GATTCCGAAG GGCCTGTTCC CGGTGCAGGA CGTCGGCGTG
ATCCAGGGTA TCAGCGTGGC CGACAACTCG GTTTCGTACA CGGCGATGGT CCGTCGCCAA
AGCGCCCTCG CCGACGCGAT TCTGAAGGAC CCCGACGTGG TGTCGCTCAC CTCCTATGTC
GGCATCGACG GGACCAATCC GACGCTGAAC AACGGCCGCT TCCTGATCAA TCTGCGCCCG
CGCGACGACC GCTCGGTCAC CGCCGAGGAA ATCGGCCGGC GGATCCAGCA GGAAGTCGCG
AACGTGCCCG GCATTCGCCT GTATCTGCAA CCCGAGCAGG ACCTGACGCT CGACACCTCG
GTCTCGCGCA ACCAGTACAA CTTCGTGCTG CGCGGGCCGA ACCAGCAGGC CTTCAACCAG
TACGTGCCGG CCTTGATCGC GCGCATGAAG CAGATTTCGT CGATCACGGA CGTGACGAGC
GATCTGAACA CCAACGGCCT GAGCGTGAAC GTGGAAGTGA ACCGCCAGCT TGCCGCGCGC
TACGGCATCA CCGCGGCCAC GATCGACAAC GCGCTGTACG ATGCGCTCGG CCAGCGCATC
GTCTCGACCA TCTTCCAGCA GTCCGATCAG TACCGCGTGA TTCTGGTGGC GAAGCCCGAG
ACGCTGCCTA CCGTGCAGTC GATCGGCAAT CTGTATCTGC CGAGTCAGAC CAGCAGCAGC
GGCCAGGTGC CGCTGTCGGG CATCGCGAAG ATCAGCATCA CGCAGTCGCC GCTGATGATC
AGCCATCTCG CGCAGTTCCC CTCGGTGACG ATCTCGTTCA ACCTCGCGCA GGACGCGTCG
CTCAGCGCCG CCGTGGCGCA AATCCGCGAC GCCGAGCGCG CGGTGCAACT GCCGCCGTCC
ATCACGACCT CGTTCCAGGG CGCGGCGCAG GCATTCGAAG ACTCGCTCTC CAGCGAGGTA
TATCTGCTGA TCGCCGCGCT CGTCGCCGTG TATATCGTGC TCGGCGTGCT GTACGAGAGC
TACATTCACC CGGTGACGAT TCTTTCGACG CTGCCCTCGG CCGGCATCGG CGCCCTGCTC
GCGCTGATGA TCGCGGGCAG CGATCTCGAC GTGATCGGCA TTATCGGCAT CGTGCTGCTG
ATCGGCATCG TCAAGAAGAA CGCGATCATG ATGGTCGACT TCGCGCTCGA AGCGGAGCGC
GTGCACGGCA AGCCGGCGCG CGAAGCGATC TTCGAAGCGT CGCTGCTGCG CTTCCGGCCG
ATCCTGATGA CCACGCTCGC GGCCATGCTC GGCGCGCTGC CCATGCTGCT CGGCACCGGC
ACCGGCTCCG AACTGCGCCG GCCGCTCGGT CTCGCGATCA TCGGCGGGCT GATGGTGAGC
CAGGTGCTGA CGCTGTTCAC CACGCCGGTG ATCTATCTGT TCTTCGACCG CCTCGCGCAG
CGCGTGAACA GCAGGCGGCG CGCCGCGAGT GAGGGCGCCG CCGCACCGCC GGAGAACACG
CCGTGA
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| Protein sequence | MNFSRLFILR PVATSLLMVA LVLVGLVAMR FLPVSSLPDV DYPTIQVQTF YPGASPNVMA
TTVTAPLEVQ LGEIPGLQQM VSYSSEGASV ITLQFDLSLN LDIAEQNVQQ AINAANSFLP
TGLPAPPTYA KVNPADQPIL TLAVTSKSMS LTQLQDTANN RLATKISEVP GVGLVTTAGG
NVPAVRVEAD PQKLAAYGLN LDDLRTLLAN VNVSQPKGNF DGPELDYTIN ANDQIVDPQD
YLDSVIAYQN GAPVYLRDVA RVSQAAQDVE RGAWYNRTPA IVLNVQRQPG ANVIATVNQI
MKQLPALEST LPAGLQVTVV ANTTGVIRSS VSDAAFELVL AVVLVVLVIF VFLRNVPATI
IPSISVPVSL IGTLAVMYQL NYSIDNLSLM ALIIATGFVV DDSIVMIENI VRYLEEGKTP
LEAALEGAGQ IGFTILSLTV SLIAVLIPLL FMGGVIGRLF SEFAITLAVT IVISAVVSLT
VVPMLCARLL RAQAQRHPSR FERFSEGLFD RTLAAYERGL NWVLDHQMLT LAVALITVAL
TAILYIVIPK GLFPVQDVGV IQGISVADNS VSYTAMVRRQ SALADAILKD PDVVSLTSYV
GIDGTNPTLN NGRFLINLRP RDDRSVTAEE IGRRIQQEVA NVPGIRLYLQ PEQDLTLDTS
VSRNQYNFVL RGPNQQAFNQ YVPALIARMK QISSITDVTS DLNTNGLSVN VEVNRQLAAR
YGITAATIDN ALYDALGQRI VSTIFQQSDQ YRVILVAKPE TLPTVQSIGN LYLPSQTSSS
GQVPLSGIAK ISITQSPLMI SHLAQFPSVT ISFNLAQDAS LSAAVAQIRD AERAVQLPPS
ITTSFQGAAQ AFEDSLSSEV YLLIAALVAV YIVLGVLYES YIHPVTILST LPSAGIGALL
ALMIAGSDLD VIGIIGIVLL IGIVKKNAIM MVDFALEAER VHGKPAREAI FEASLLRFRP
ILMTTLAAML GALPMLLGTG TGSELRRPLG LAIIGGLMVS QVLTLFTTPV IYLFFDRLAQ
RVNSRRRAAS EGAAAPPENT P
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