| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2008 |
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| Symbol | |
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| ID | 4007496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1161607 |
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| End bp | 1162947 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637950697 |
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| Product | RND efflux system membrane fusion protein |
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| Protein accession | YP_553327 |
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| Protein GI | 91778119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0541376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0158749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG CGCCGTCAAC CCCGGTCAAA CGTCCGCGGC GAGGCCGTAT CGTGCTTGCG
GTCGTGGTGC TGGCGCTGAT CGCGCTGGTG GCCTTCCATC TGTTGCGCTC CAAGGCGCCC
AAGCCCGGCG TGGCGCCCCA GGTCGTGACC GTCTCCACCG CGACCACCGG ACCCATGCCG
GAAACGCTGA GCGAGTTGGG CACGGTGACG CCCGTCGCCA CGGTAACTGT CCTGCCGCAG
TTGAGCGGCT ATCTGACCGC CGTCGGCTAC CGCGAAGGGC AGGACGTCCA GAAAGGCCAG
TTTCTCGCGC AGATCGACCC GCGCCAGTTT GAAATCAGCA AGCGCCAGGC CGAGGCGCAA
CTCGCCAAAG ACAAGGCGGC GCTCGCCCAG GCGCGCGCCG ATCTCGCGCG CTTTACGCAA
CTCAACGAAC GCAAGTCGAT CGCCGAGCAG ACCTATGCGG ATCAGCAGTT TCTCGTCCAG
CAGAACGAAG CGGCGGTCAA GGCCGACGAA GCCAACGTCG CGCAGTTCGA GCTCGACCTG
ATCTATTGCC ACATCACCGC GCCGGTGTCG GGGCGGGTCG GGCTGCGCCT CGTCGATCCG
GGCAACTACG TCACGGCGTC GAGTCAGCCG GGCATTGCGG TGATCACGAC GATGAAGCCG
ACCACGGTCG AATTCACGGT GCCGCAAACC GCGCTCGACA AAGTGCTCCG GCGCACCAAC
TCCGGCGCCC AACTGCCCGT CACGGTGTTC AGCAGCGACA ATTCCCGGCA GCTCGCGACC
GGCACGCTGT ACGCGATCAA CAACCAGATG GCGACCGCGA CCGGCACGGT TACGCTGCGC
GCCACGTTCG CCAATGAGGA CGAGGCGCTC TTCCCCAACG AGTTCGTCAA CGTCAGGCTG
CTGGTCGACA CGCTGCAGAA CGCGGTGCTG GTGCCGACTC CCGCGGTGCA GAGCGGCGCG
CCCGGCGACT ACGTCTATCT GGTCAACGCC GACGATACGG TCTCGGTGCG CAAGGTCACG
CTGGGACCGG GCGACGGCCA GCATACGGTG ATCGCGTCGG GGCTCGCCGC CGGCAACGTG
GTCGTCACCG ACGGCATGGA CCGCCTGAGC GACGGCGTGA AGATCAAGGC ATCCGCCGCC
CGGCCGGCTT CGGGCGCCGT GGGCACTTCA GGCACTTCAG GCACTTCAGG CACTTCAGGC
ACTTCAGGCA CTTCAGGCAC TTCAGGCACT TCAGGCACTT CAGGCACTTC GGCCGCCGCG
CCGCTGGCGC CGCCGCCCGA GCCCGCCGCC AGCCCCACGC GTGCGGCGTC CGCGCCCGGC
GCGGCTTCCG TGGCTTCGTA G
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| Protein sequence | MSEAPSTPVK RPRRGRIVLA VVVLALIALV AFHLLRSKAP KPGVAPQVVT VSTATTGPMP
ETLSELGTVT PVATVTVLPQ LSGYLTAVGY REGQDVQKGQ FLAQIDPRQF EISKRQAEAQ
LAKDKAALAQ ARADLARFTQ LNERKSIAEQ TYADQQFLVQ QNEAAVKADE ANVAQFELDL
IYCHITAPVS GRVGLRLVDP GNYVTASSQP GIAVITTMKP TTVEFTVPQT ALDKVLRRTN
SGAQLPVTVF SSDNSRQLAT GTLYAINNQM ATATGTVTLR ATFANEDEAL FPNEFVNVRL
LVDTLQNAVL VPTPAVQSGA PGDYVYLVNA DDTVSVRKVT LGPGDGQHTV IASGLAAGNV
VVTDGMDRLS DGVKIKASAA RPASGAVGTS GTSGTSGTSG TSGTSGTSGT SGTSGTSAAA
PLAPPPEPAA SPTRAASAPG AASVAS
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