| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1954 |
|---|
| Symbol | |
|---|
| ID | 4007549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1214530 |
|---|
| End bp | 1215426 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637950746 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_553376 |
|---|
| Protein GI | 91778168 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.513058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.328983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TTTCACGAGC GATGGCGCTG TCGGCTGCCA TTCTGGCTCA TGGCGTAATC
ACTCCAGTTC ATGCTCAGGA AAAGGTATCC TCCATGTCCG AAAAATCTGC ACCTGGCAGT
ATTCAGCAAC CGACCCGGGC CCAGCAGTTG ATGGGCGACA TCGACCCCAA GCTTGCGGAA
CTCACGGACA AGGTGCTGTT CGGCGACGTC TGGGAGCGCA AACAGCTCTC CAAACGCGAC
CGCAGCCTTG TCACCGTTGC CGCGCTCATC TCCCTCAATC GCCCCGACCA GCTTCGCTCA
CACATGGCAC TGGCCCTGCA GAACGGCGTG ACCCGAGAGG AACTGGTCGA GACGATCACG
CAGCTTGCTT TTTATACAGG CTGGCCCAAT GCCGTTTCGG CTGTGCCGGT CGCCAGAGAC
GTATTCAGGG CGGCGGACGC TGCGGCGAGC CATCCCGATC AGGGCGCGCA AGCTCAGGAC
GATCGAACGA TCACAGTCAT ACACGCGGGC TCCCAGCCTT CCACCCACGG ATCTGCCGAC
CATTTCACCG GCTCGGTACA GGTGGATTCA CGGTTCCAGG CGCAGGCGCC CGCGCGCAGC
GGTGGTGGCA TCGTGACGTT CGAGCCAGGT GCACGTACAG CCTGGCACAC GCATCCATTG
GGACAGACGC TGATCGTCAC GGCCGGCATC GGACTCGTTC AGCAGTGGGG TGGTCCGGTC
CAGGTCATCA AACCCGGCGA TATCGTCTGG ATTCCGCCGG GGGTCAAGCA CTGGCACGGT
GCCACGCGCA CGTCGGGCAT GACGCACATT GCCATCGCGG AAGCACTTGA CGGGAAATCG
GTTGACTGGA TGGAACTGGT GATGGATGCG CAGTATCTGG GAGGTCAGCC AAGGTAA
|
|---|
| Protein sequence | MKSFSRAMAL SAAILAHGVI TPVHAQEKVS SMSEKSAPGS IQQPTRAQQL MGDIDPKLAE
LTDKVLFGDV WERKQLSKRD RSLVTVAALI SLNRPDQLRS HMALALQNGV TREELVETIT
QLAFYTGWPN AVSAVPVARD VFRAADAAAS HPDQGAQAQD DRTITVIHAG SQPSTHGSAD
HFTGSVQVDS RFQAQAPARS GGGIVTFEPG ARTAWHTHPL GQTLIVTAGI GLVQQWGGPV
QVIKPGDIVW IPPGVKHWHG ATRTSGMTHI AIAEALDGKS VDWMELVMDA QYLGGQPR
|
|---|
| |