| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1889 |
|---|
| Symbol | |
|---|
| ID | 4007613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1277040 |
|---|
| End bp | 1277786 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637950800 |
|---|
| Product | putative glutaconate CoA-transferase, subunit B |
|---|
| Protein accession | YP_553430 |
|---|
| Protein GI | 91778222 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.694614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG TCACGGCTGG CGAATGGACC GGCTTTTCGT ACATCGTCAC GAATCTCGCG
CGCTTCATCC GGCCCAACGA GATCACCTTC AGCGGCGTGA ATTCCACGCT GCCGATGCTC
GCCTGCCTGT TCGCCAAACG CGCCTACGAC TGGGACTTCG TGTACCTGAA CGTGGCGGGC
GGCGTGGATC CGTCGCCGTC GAAGATCCCG ATTTCGAGTT CAGATCCGGT ACTGGCCGAA
GGCTCGGCTT CGATCTTTGC CAATGAGGAT TTCTATGACC TGTGCACGCG CGGCCGGATG
GATCTGACCT TCCTCGGCGC GGCGCAGATC GACGGCGCCG GCTGCGCGAA CAACTCGTGC
ATCGGTGCAT GGGCGCACCC GAAAGTGCGT CTGCCGGGCG GCGGTGGCGG CGCGGTGATG
CTGCCTACCG CACGGCGCGC CTGCACGTGG CGCACGGAAC ATTCACGCCG CACGCTGGTC
GAGAAACTCG ACTTCGTGAC ATCGTGGGGC GGCATGCATG GCGTAGTCAC GCCGATCGCC
GTGTTCGTCA AACGCGATAA CCGTCTTGCG CTGCAATCGT GGCACCCCGC GGTGAGCATC
GACGAAGTGT GCGAACGCAC CGGCTTCACG TTCGATACGC GCGGCGCCGA GCCGACACCA
CCGCCGAGCG CACGCGAACG CGATGCGCTG CGCGCGCTCG ATGCCGACGG CCAGTTCGAA
CGCGACGCCG CGATCAGGCT GAGGTAA
|
|---|
| Protein sequence | MAEVTAGEWT GFSYIVTNLA RFIRPNEITF SGVNSTLPML ACLFAKRAYD WDFVYLNVAG
GVDPSPSKIP ISSSDPVLAE GSASIFANED FYDLCTRGRM DLTFLGAAQI DGAGCANNSC
IGAWAHPKVR LPGGGGGAVM LPTARRACTW RTEHSRRTLV EKLDFVTSWG GMHGVVTPIA
VFVKRDNRLA LQSWHPAVSI DEVCERTGFT FDTRGAEPTP PPSARERDAL RALDADGQFE
RDAAIRLR
|
|---|
| |