Gene Bxe_B1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1886 
Symbol 
ID4007616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1279393 
End bp1280547 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID637950803 
ProductAlpha-methylacyl-CoA racemase 
Protein accessionYP_553433 
Protein GI91778225 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.494704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGC CTCTTCAAGG AATCAGGGTC ATCGAGTTCT GCAACGTCGC CGCGGGACCT 
TTTTGCGGCA TGTTGCTGGG GGACATGGGC GCAGATGTCA TCAAGGTCGA ACATCCCAAT
GGCGGCGATA CGCTGCGCGC GTGGCCGCCC ATCTCCGAGG GCTACAGCGA AAATTTTGCG
TCGTTGAATC GCAACAAACG CTCGGTCACG CTGGATCTGA AAGACCCGGG TGATGTCGAG
CAGGTCCGCC GGTTGATCGA TAGCGCCGAC GTGCTGATCG AGAACAACCG TCCCGGTGTC
ATGTCGCGCC TCGGCCTCGG CTACGAGGAA ATTCACCAGC GCGTGCCGCG TCTCATCTAC
TGCTCGATCT CGGCCTACGG TCAGTCCGGC CCGCGTTCGC AGGAAGGCGG TTTCGATCTG
ACCGTGCAGG CAATGAGCGG CATCATGAGT ATCACGGGCG ATCCGGGAGG CCCGCCTGTC
AAATGCGGCG TGCCGCTCGC CGATTTTTCG GCGGGTCTGT ATGCCGCCTT CTCGATTGCG
GCCGCACTAC GAGCCGCCGC GGAAACGGGC GTCGGCACGC ACGTCGACGT CCCCATGCTG
GGCGCGACGC TGGGGATCGC CGCGTTGCAA ACCTCGGAGT ACTTCGGCAC CGGCAACGAT
CCGGTCAAAC TCGGCTCCGC GCATCCGCGC AATGCGCCGT ATCAGGCGTT CTCCGCGCGC
GATACCTACT TCGGCATGGC CGCGGGCAAC AATGCGCTAT GGCGCAGCGT TTGCGAAGTC
ATCGGCATGC CGGAGCTGGA GAAAGACGAG CGCTACACCA CAACGACACT CCGCGCGCGT
CACCAGACCG AACTGCGCAC TACGCTAGAA GGGGTGTTCA GCCAGCATGA CGCGGCGCAC
TGGATCGAGC GGTTCCGTGC CGCCGGCGTG CCGTGCGCAC CGATCAACAC CTATTCGCAA
GTATTGGCCG ACGAACAGGT CGAACATATG CAGTGGGTAC AGCCTGTCGA ACTGCCCAAC
GGCGTGTCGA CTCGCACCTT CGTATCGCCG GTGCGCTTCG GCGGCGAGAC GCCAAAGATT
CTGCGCCGGC CGCCCGCGCT CGGCGAACAC AACGACGAAC TGCTCAGCCG CGCCAGCACG
GAGGTAAATG CATGA
 
Protein sequence
MYLPLQGIRV IEFCNVAAGP FCGMLLGDMG ADVIKVEHPN GGDTLRAWPP ISEGYSENFA 
SLNRNKRSVT LDLKDPGDVE QVRRLIDSAD VLIENNRPGV MSRLGLGYEE IHQRVPRLIY
CSISAYGQSG PRSQEGGFDL TVQAMSGIMS ITGDPGGPPV KCGVPLADFS AGLYAAFSIA
AALRAAAETG VGTHVDVPML GATLGIAALQ TSEYFGTGND PVKLGSAHPR NAPYQAFSAR
DTYFGMAAGN NALWRSVCEV IGMPELEKDE RYTTTTLRAR HQTELRTTLE GVFSQHDAAH
WIERFRAAGV PCAPINTYSQ VLADEQVEHM QWVQPVELPN GVSTRTFVSP VRFGGETPKI
LRRPPALGEH NDELLSRAST EVNA