| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1872 |
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| Symbol | |
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| ID | 4007630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1295036 |
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| End bp | 1295899 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637950816 |
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| Product | ABC transporter, inner membrane subunit |
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| Protein accession | YP_553446 |
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| Protein GI | 91778238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | [TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.331419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.27167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTG AACTCGATCC GACCGTCTTG CCGGTCATGC ACAAGAAAGC GCGGCCGGTG
CGCCGCAGTC TGCCGGTACG CATGCTCGGC GGCCTGTTTC TCGGTTTTGC CGCGCTGCTG
TGCTTCTGGC TGTTCGTGCT GCCGGTGCTG GTCGTCGCGC TTTCGAGCGT GGCCGCGCAC
TGGTCCGGCA CGATCCTGCC CGACGGCTTC AGCACACGCT GGTTCGAACG CCTCGGTTCG
AGCGACTTCG ACGCGCTCAC CACCAGCCTC GAAATCGGCA TGGGCGTCGC GGTGCTCGGC
ACGATTCTCG GCCTGTGGCT CGCGCTGGCG CTCGAAGGGC GCGACCGCCG CGGCCTCGGC
GCCTTCGTCG ACACCGTTGC GATGATGCCC AACGGCGTGC CGAGCGTGGT GCTCGGGCTC
GCGGTGCTGA TTGCGTATCA CAAGCGTCCG CTCGATCTGT CGAGCTCCGC GGCGATCGTC
GTGTTCGTGC AACTCGCGCT CGTGCTGCCG TTCTGCTATC GGTGCGCCGC GGCCGCGTTG
CGCCCGGAAC TGACGATTCT GCGCGAAGCG GCGGCAAGTC TCGGCGCGCC GCCTTCGATG
GTGTTGCGCC GCGTCGTGCT GCCGCAACTG GTGCCGGCGA TCCGCGCGAG TCTAGCGCTG
GGGTTCGCGC TCTCGCTCGG CGAACTCGGC GCCACGCTGA CCGTGTATCC GCCGGGCTTT
GCGACGGTGC CGATCGTGGT CATCGGCCAG GTGGAGCGCG GCTATTACCT GCCGGCTTCC
GCGCTGTCGC TGATTCTTCT GCTGGTCTCG CTGGCCGCGC TGCTGCTGAT CGCGGCGCGC
GTGCCGCGCC GTCGGGCAGA CTGA
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| Protein sequence | MAVELDPTVL PVMHKKARPV RRSLPVRMLG GLFLGFAALL CFWLFVLPVL VVALSSVAAH
WSGTILPDGF STRWFERLGS SDFDALTTSL EIGMGVAVLG TILGLWLALA LEGRDRRGLG
AFVDTVAMMP NGVPSVVLGL AVLIAYHKRP LDLSSSAAIV VFVQLALVLP FCYRCAAAAL
RPELTILREA AASLGAPPSM VLRRVVLPQL VPAIRASLAL GFALSLGELG ATLTVYPPGF
ATVPIVVIGQ VERGYYLPAS ALSLILLLVS LAALLLIAAR VPRRRAD
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