| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1844 |
|---|
| Symbol | |
|---|
| ID | 4007663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1327804 |
|---|
| End bp | 1329465 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637950849 |
|---|
| Product | malonate decarboxylase alpha subunit |
|---|
| Protein accession | YP_553474 |
|---|
| Protein GI | 91778266 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
|---|
| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0934174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC CCGCCGAAAC GTCACCCCCC GCGCGTTCGT GGACCACGCG CCGCGACGAA
AAGAACCGTC GCCTCGCGGC CATCGCCCCC TGGCTCGAAG ACGGTGTGCT GCCGCCGGGC
CGTATCGTCG AGGCGCTCGA AATGCTGATT CAACCGGGCG ACCGTGTCGC GCTCGAAGGC
GACAACCAGA AGCAGGCCGA CTTCCTGTCC CGCTCGCTCG CCAGGGTCGA TCCGCAAAAG
ATTCACGACG TGCATCTGCT GATTTCGAGC ATTGGCCGTC CCGAGCACCT GACGCTATTC
GAGCGCGGCA TCGCGCACAA AGTCGACTTC TCGTTTGCCG GCCCGCAAAG TCTGCGGGTC
GCGCAACTGC TCGAAGACGG CCAGCTGGAA ATCGGCGCGA TCTATACGTA CGTGGAGTTG
TACGCGCGCA TGTTCGTGGA TCTCACGCCG CACGTCGCGC TGCTGTGCGC GGAAAAGGCC
GACCGCCACG GCAATCTGTA CACCGGCGCG AATACCGAAG ACACGCCCAC CATCGCCGAG
GCGGCCGCCT TCCGTCATGG CATCGTGATC GTGCAGGTCA ACGAGATCGT CGACGAATTG
CCGCGCGTGG ACATTCCGGG TTCATGGGTG GACGTGGTCG TGCAGGCGGA CCGGCCGTTC
GCCGTCGAGC CGCTGTTCAC GCGCGATCCG CGCCATATCG GCGACCTGCA GGTGCTCACG
GCGATGATGG TGATTCGCGG CATTTACGAA CCGTACGGCG TAACGTCCCT GAATCACGGC
ATTGGTTTCG ATACGGCCGC GATCGAACTG CTGCTGCCCA CCTACGGCGA GTCGCTCGGC
CTGAAAGGCA AGATCTGCCG CAACTGGACG CTCAATCCGC ATCCCACCAT GATTCCCGCG
ATCGAATCGG GCTGGGTCGA CAGCATTCAT TGCTTCGGCA GCGAAGTCGG CATGGAGGCG
TATATCGAGG CGCGTCCCGA CGTGTTCTTC ACCGGCAGCG ACGGCAGCCT GCGCTCGAAC
CGCGTGCTGT GCCAGCTGGC CGGGCAATAC GGCGTCGATC TGTTCATCGG CTCGACCCTG
CAGATCGACG CGGACGCGAA TTCGTCGACC GTCACGCGCG GGCGTCTCGC CGGATTCGGC
GGCGCGCCGA ACATGGGCCA CGATCCGCGC GGCCGGCGTC ATTCGAGCCA GGCGTGGCTC
AAGCTGCTGC GCGACGAGGG CCCGGTGTCG CGTGGCCACA AACTCGTCGT GCAGATGGCC
GAGACCTACA AGAAAGGCGG CGAGCCGACC TTCGTCGATG AACTCGACGC CGTCGCGGTC
GGCGCGAAAA GCGGCATGCC GATCGCACCC GTGATGATCT ACGGCGACGA CGTCAGCCAT
GTCGTCACCG AGGAAGGCAT CGCGCATCTG CACAAGGCCG AAGGCATCGA CGAGCGGCGC
GCGGCGATCG CGGCCGTGGC CGGCGTGACG CCGATCGGGC TGCGCGCCAG ACCGGAGAAG
ACCGCGGAGT TGCGCCGGCG CGGCATCGTC GCGTATCCGG AGGACCTGGG CATTCGTCGC
GGCGAGGCCA AGCGCTCGCT GCTGGCGGCG CGCAGCATCG ACGATCTGGT GACGTGGTCG
GGTGGCCTGT ACGAGCCGCC CGCGCGCTTC AGGAGCTGGT GA
|
|---|
| Protein sequence | MNRPAETSPP ARSWTTRRDE KNRRLAAIAP WLEDGVLPPG RIVEALEMLI QPGDRVALEG
DNQKQADFLS RSLARVDPQK IHDVHLLISS IGRPEHLTLF ERGIAHKVDF SFAGPQSLRV
AQLLEDGQLE IGAIYTYVEL YARMFVDLTP HVALLCAEKA DRHGNLYTGA NTEDTPTIAE
AAAFRHGIVI VQVNEIVDEL PRVDIPGSWV DVVVQADRPF AVEPLFTRDP RHIGDLQVLT
AMMVIRGIYE PYGVTSLNHG IGFDTAAIEL LLPTYGESLG LKGKICRNWT LNPHPTMIPA
IESGWVDSIH CFGSEVGMEA YIEARPDVFF TGSDGSLRSN RVLCQLAGQY GVDLFIGSTL
QIDADANSST VTRGRLAGFG GAPNMGHDPR GRRHSSQAWL KLLRDEGPVS RGHKLVVQMA
ETYKKGGEPT FVDELDAVAV GAKSGMPIAP VMIYGDDVSH VVTEEGIAHL HKAEGIDERR
AAIAAVAGVT PIGLRARPEK TAELRRRGIV AYPEDLGIRR GEAKRSLLAA RSIDDLVTWS
GGLYEPPARF RSW
|
|---|
| |