Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1819 |
Symbol | |
ID | 4007688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1353937 |
End bp | 1354764 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637950874 |
Product | ABC amino acid transporter, periplasmic ligand binding protein |
Protein accession | YP_553499 |
Protein GI | 91778291 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.309777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.651618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATCC TTGCAGGCTG GAAGTGTCGT TTGGTCATGC TGGCGTTGTG CGCGGCAAGC GCCACCGCCC ACGCGGAAGA CCAGCTCGCC AAAGTGAAAA AAGCCGGCGA ACTGGTGGTC GGCACCGAGA TGCAGTTCGC CCCTTTCGAC TTCCTTGAAA ACGGCCAGCA AGCGGGTTTC AACAAGGATC TGTTCGCCGA GGTCGGCAAG GAAATGGGCG TGAAGGTGCG CTTTATCGAC TTGCCGTGGC CGAGCGTGCT GCCGGGTCTG GAAGCGGGCA AGTTCGACAT GGTGGGCGGC CCGCTCACCG TCACCAAGGC GCGCATGGAG CGCTACACGT ACACCTTGCC GATCGCGGAC GCGACCGACG CGCTGCTCAA ACGCGCGAAC GACTCGTCGC TCAGGCAATC GTCGGATATC GCGGGCAAGA CGGTCGGCGC CGGCAAGGGC TCGGCGCAAC TCGACCAGTT GAAGGCCTAC GTTGCCACGT TGCCGAAGCC GCCTGAAATC CGCGAATACG TCGACAACAA TCAGGCTTAT GCCGATCTCG CCGCGGGCCG GATCGTGGCG GTGGCGAACT CCATGACCAA CATTGCGTAT GTGGCCAAGC AGCGGCCGGA AACATTCGCC GTGGTGCAGC CGCCGTTCGG CGCCAAGGTG TACTTCGCCT ACTGTTTGCG TAAAGACGCG GACAGCAAGC CGCTCGCCGA TGCCTTCAAC GCCGCGCTCG TGAAAATGCA CAACGACGGA CGCCTTGCCG CGTTGCAGAA GAAATGGTTC GGCGTCGCAA TGGACGCACC GACCACCATG CCCGCGCCGA ACTATTGA
|
Protein sequence | MSILAGWKCR LVMLALCAAS ATAHAEDQLA KVKKAGELVV GTEMQFAPFD FLENGQQAGF NKDLFAEVGK EMGVKVRFID LPWPSVLPGL EAGKFDMVGG PLTVTKARME RYTYTLPIAD ATDALLKRAN DSSLRQSSDI AGKTVGAGKG SAQLDQLKAY VATLPKPPEI REYVDNNQAY ADLAAGRIVA VANSMTNIAY VAKQRPETFA VVQPPFGAKV YFAYCLRKDA DSKPLADAFN AALVKMHNDG RLAALQKKWF GVAMDAPTTM PAPNY
|
| |