Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1762 |
Symbol | |
ID | 4007745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1423080 |
End bp | 1424285 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637950931 |
Product | major facilitator superfamily (MFS)transporter |
Protein accession | YP_553556 |
Protein GI | 91778348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0112506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0259533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGATA TTTCCTTATA CCCAAAGGTG CTGTTCCGAA GGGACGCGCC GACATGGTTT CTCTATCTGG TGCTGACAAT TTTTGGTTTC CAGCAGTCGG TGCTGGGTTC CACATTACCG TTCCTGAGTA GTGAATTTCA CTATGACACG GTACAGGTAG GATGGCACTT TACGTTTTAC GCGATCGGAC TTGTTGCCTC CGGGTTTTTG AGCAGTGCGC TGCTTAAGCG CATGCAGATC AACACATTGA TTCGGATTTC TGCGGTTGCG ATGGTAACGG CGGTGCTTGC AATCACGCAG GTGAGCGGCT TGACGGGTAC GCTCCTCGTT GCGGTTGCAA TGGGATTGAC CGGGGGATGT GTACAGGCGG CCGTGCAAGC TGGCATTGCG TGGCACCACG CCGAGAATCG CGACATGGCG ATGGTGGAGG CTTTTGTCTG TGCGGGAGTA GGCGTGTTCG TTGGACCTTT GTTGATCGGT CAGGCCTCGG CAGCAGGGTT ATCATGGCGT TTCGCTTTGC TAGTCTGCGC AGCTGCGCTG GCCATCGTCT TTGCGACGCT TCCCGGCCCG AGTATGCCGG CTGACCGCGC GGCGCCACTT CTTGCACCGG ATGATGATGC AGGCGCGCGT TTGAGCAGGG TTCCATTTTC CGTGGTGTTG AGTTGGTTGA TGGTTGTGCT CGGCATCGGA GCGGAGTGGG GAGTCGGCTT CTGGGGAGCA CAGTACCTTG AAATCCGCCT CTCACTTAGC CCTGCGGAAG CCGTGAGTAT GATGGCGTTC TTTTTCGGCG GCACCGTCCT CGGTCGCCTG GTGTCGAGCC GTCTCCTGGC GGTGCTCGAC GGTCGCATTA TGCTTCCGGC CGTTATTCTG CTTGGCGGTA TCGCCATCTT TACCCTATGG ATCAGCGAAC TGCGCTTGGG AACACTCGCC TCGCTCGTAA CGGCGGGTAT GTGCCTCGGC AATTTTTTCC CGTTGATTAT CAGTAACGCC ATTCGGCTTG CGCCAACACG CGTAACACTG ATTTCTGTTG GTGCCACACA AGCCGTTGGT GTTTCGCTGC TCATCGTGCC AATTGCGCTT GGCTATCTGG GCCAGTCGAT TGGGCTGGTC AACGCAGTCG GCATTCTTGC GGTGTTACCC GCGCTTATGG TAGTTGCCAA TTTTTGCGCG TCTTCGTGCA CCCGATCGAG CGCTCGCGGC GTCTAG
|
Protein sequence | MNDISLYPKV LFRRDAPTWF LYLVLTIFGF QQSVLGSTLP FLSSEFHYDT VQVGWHFTFY AIGLVASGFL SSALLKRMQI NTLIRISAVA MVTAVLAITQ VSGLTGTLLV AVAMGLTGGC VQAAVQAGIA WHHAENRDMA MVEAFVCAGV GVFVGPLLIG QASAAGLSWR FALLVCAAAL AIVFATLPGP SMPADRAAPL LAPDDDAGAR LSRVPFSVVL SWLMVVLGIG AEWGVGFWGA QYLEIRLSLS PAEAVSMMAF FFGGTVLGRL VSSRLLAVLD GRIMLPAVIL LGGIAIFTLW ISELRLGTLA SLVTAGMCLG NFFPLIISNA IRLAPTRVTL ISVGATQAVG VSLLIVPIAL GYLGQSIGLV NAVGILAVLP ALMVVANFCA SSCTRSSARG V
|
| |