Gene Bxe_B1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1727 
Symbol 
ID4007779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1457863 
End bp1458306 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID637950964 
Productprotein tyrosine phosphatase 
Protein accessionYP_553589 
Protein GI91778381 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0489525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.734916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA ATTCCATTCT GATCGTTTGC GAGGGGAATA TCTGTCGAAG CCCGATGGCC 
GAGGCGCTGG CCAATGATCT GTTTCCACGG ATTCGCGTCA GCTCCGCCGG ATTGAACGCG
CTGATCGGCA GAAAGGCCGA TCCGTTTGCC ATGTCGGCCA TGATGGAGCG AGGGCTCTGT
CTGGAGAAGC ACGTGGCACG CCAGCTCAGC TGGTCGATGG TGAAGGCCGC GGACATGATC
CTCGTCATGT CCGCCGAGCA GAAGAAGAGG GTTGAAGACA CTTACCGGTT CGCAACAGGC
CGAACTTATC GAGTGGGCCA TTTTCAGCAA TTCGACGTGG CTGACCCGTA CCAGAAAGGC
AAAGCTGAGT TTGAAAAAGC GTTTGTGTCG ATCGAAGCGG GCTTGAAGCG TTGGTCATAC
GCGCTGGAAG AACTGAACGT ATAA
 
Protein sequence
MSVNSILIVC EGNICRSPMA EALANDLFPR IRVSSAGLNA LIGRKADPFA MSAMMERGLC 
LEKHVARQLS WSMVKAADMI LVMSAEQKKR VEDTYRFATG RTYRVGHFQQ FDVADPYQKG
KAEFEKAFVS IEAGLKRWSY ALEELNV