Gene Bxe_B1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1680 
Symbol 
ID4007826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1509934 
End bp1511016 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID637951011 
ProductCa2+/H+ antiporter 
Protein accessionYP_553636 
Protein GI91778428 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.56452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.743279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCGCGACCGT TCTGCCCCGC TGGACCATTG CCGTGCCGTT CGTCGCGTGG 
ATCGTGCTCG GCATCGCGTA TGCCATGCCG GGCCACGGCC TGCTGCTCGC GCTGGTCGGC
GTGGCGCTGT GCGCCGCCGT CTTCACGGCG GTGCACCACG CGGAGGTGGT CGCGCATCGC
GTCGGCGAGC CGTTCGGCAC GCTGGTGCTG GCGGTGGCGG TCACCGTGAT CGAGGTGGCG
CTGATCGTCT CGGTCATGCT CACGTCCGGC CCGGAGAAAG CCGGTCTGGC GCGCGACACG
GTGTTCGCCG CGGTAATGAT CGTCTGCAAC GGGATTGTGG GCCTTTGCCT GCTGGTGGGC
GGCATCCGGC ATCGCGAGCA GGATTTTCAG AGCCGTGGCG CTTCGGCGGC GCTGGCTGTG
CTCGCCTCCC TGTCCATCCT GACGCTCGTC ATGCCGAACT ACACGACGAC CAGTGTGGGT
CCGGTCCTGT CGTCTTCGCA GTTGGCGTTC GCCGGGATGT CGTCGCTGGT GCTGTATGGC
GTATTCGTGT TCGTGCAGAC CGTGCGCCAT CGCGATTACT TCCTCGCCGC CACGCCGGAT
GAAAGCGTCC ACGCCGCACC GCCGACCGCC GGCGAGGCGC TGGCGGCCGC CGGCTTGCTG
CTGGTGTGCC TCGTCGCGGT GGTGCTGCTC GCCAAGGTGC TCTCGCCGGT GGTCGAAACC
GCGGTCCGGA ATGCGGGCGC GCCGGCGGCC GTGGTCGGCA TCGTGATCGC CGCACTGGTG
CTGCTGCCCG AAGGGCTTGC CGCCGTGCGC GCGGCGCGTG CCGATCGCTT GCAGAACAGC
CTGAATCTCG CGCTCGGCTC GGCGCTTGCC AGTATCGGCC TGACTATTCC GACGGTCGCC
GGGGTGTTTC TGTACACCGG TCAGCCGCTC GTGCTCGGGA TCGACGGCAA GGAAACCGTG
CTCCTCGTTC TCACGCTGAT AGTCGGCACG CTCACGCTCA GCAGCGGCCG CACGACAATT
CTGCAAGGCG CCGTGCATCT GTCGCTGTTC GCGGCGTACC TGTTTCTCTC GTTCGCGCCC
TGA
 
Protein sequence
MTTPATVLPR WTIAVPFVAW IVLGIAYAMP GHGLLLALVG VALCAAVFTA VHHAEVVAHR 
VGEPFGTLVL AVAVTVIEVA LIVSVMLTSG PEKAGLARDT VFAAVMIVCN GIVGLCLLVG
GIRHREQDFQ SRGASAALAV LASLSILTLV MPNYTTTSVG PVLSSSQLAF AGMSSLVLYG
VFVFVQTVRH RDYFLAATPD ESVHAAPPTA GEALAAAGLL LVCLVAVVLL AKVLSPVVET
AVRNAGAPAA VVGIVIAALV LLPEGLAAVR AARADRLQNS LNLALGSALA SIGLTIPTVA
GVFLYTGQPL VLGIDGKETV LLVLTLIVGT LTLSSGRTTI LQGAVHLSLF AAYLFLSFAP