| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1664 |
|---|
| Symbol | |
|---|
| ID | 4007842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1526053 |
|---|
| End bp | 1529505 |
|---|
| Gene Length | 3453 bp |
|---|
| Protein Length | 1150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951027 |
|---|
| Product | putative helicase |
|---|
| Protein accession | YP_553652 |
|---|
| Protein GI | 91778444 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0566301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAG TTTTCTTCGA TCGGGATCGC ATTGCAGAGT GGCTCGGCGA ACACACCGTC
GCCAAGGCGC GCTCGGTCGG CCCCGTCACT CATGTGCAAT GGCACGGCTC CACGCTCAGC
GGCGAGGTGC AGGGCACGCA GCCGCTTCCG TACAAGACGC GCGTGCGGTT TCGTACCGAC
GGCGGTTCGC CTTGGGCGCA GGGCGAATGC AGCTGTCCGG TCGGCCGCAA CTGCAAGCAC
GTTGCCGCGC TGCTGTTCGC CGAGCTCGAC TATCACGACG AAATGGACCA CGTCACCCAC
GTCCGCCTGG ACGACGAGGG CGAGACCGCG CGCGGCCTGG CGCGCGAGCC GATGGCGAAC
CCCGGGTCGC CCGCTGGCGT GCGGCCCGAA CTGGTTAGCT GGCTCGAGCG TTTTCGCGCC
CGCGCCGAAG CTGCGGATGC CGACGCCCAG AAGGCGAGCG CCCCACGCAC CCAGACGCTC
GCCTACCGGC TGACCTGGTC CAGATTCCAC ATGCGCCACG AGGTCGTGCT GTACCGCGCG
CGCTGCAATC CGGACGGCGC GATCGTCGAC GTGGCCGAGC CTTGGGGCAA TGTGGAAGCC
GCACTCCTCA AACAGCCCAA ATTCGTCTCC GACGAAGACC TCTCGATCCT GCGCGGTCTG
TGGCTCGGCC GCTCCCGCGA GGACTTCGGG CAGTTCATCC TGCGTGGCAC GAGCGGCGCG
GAGATGCTGC AGAAACTCAT CGCGACGGGC CGGCTGTTCG TCGATTTCAC GCCTGGCTCC
GGCCACGACG GGCCGATCCC GCTCTCCCGC GGCGCCGACC GGGCTGGCCG GATCGAATGG
GAGCCGCTCG CCGACGAGCG CCTGCGGCCG GTGCTGCGCA CCGAGCCGCG CGCCAGCATG
GTGTTGCCGA CCGAGCCGGT CTGGTATGTG GACGGCATTG CGAATGAAGC GGGCATCGTC
CAGTCTTCGC TGCCGTTCCA GCAGTTGCCC GATTACCTCG CCATGCCGCC CATCTCGCTC
GCCGAAGCGC CGCTGGTTGC TTCCGTGCTG CGCGAGATCG CGCCCGAGTT GCCGTTGCCG
CCCACGCACG ACGCGTCCGC GATTCGCGTG ATCGACGTCG ATCCCGTGCC GGTGCTCACG
CTCAACAGTC ACGCGTTGCC GTCGGCGGCG AGCAAGGCGG GTTTGCGGCA AGCCGCGGCG
GTCGAACTGG CCGGCGTCAG TTTCGATTAC GACGGCGTGA GCATCAACGT GGACAGCAGC
GTGACGCTCG TGCCGATGCC GGGCGGCGAC GTCATTCATA TCCGCCGCCG CTACGAGGCC
GAGAAAAAGC GTCTGCTCGA ACTGCGCAAG ACCGGTTTGC AGAAGGTGCC GACCAGCCGG
GTCCATGCAT CGCGCCTGCT GCCCGACACC ATGCTCGGCC TGCCCGATGC GGAGGCGTGG
TCCGCGTTCG TCAACGACTC GGTGCCCGAA CTCGTGAGCA AAGGCTGGCG CGTCACGATG
GCGCCCGAGT TCCGCTACAA CGTGATCGAG ATCGATGCGA TCGAAGGCAC GGCGCATCAG
GCCGGCGACG GCTGGTTCGA TCTGGAGATG GGCATTCGCA TCGGCGAGCG CAATGTGCGG
CTCGAACCGC TGCTCGCCGA CCTGTTCAGG CGCGACCGGC GCTGGCTGAG CGGCGCGCTC
GAATCCATCC GCGACGACGA GCCGATCGAG CTGAAGACCG AGGAGAACAA GCGCCTGCGC
CTGCGCGCCG ACCGCCTGAA ACCGGTGGTG CGCGTGCTCG TCGATCTGTT CGACGCGCTC
GGCGGCTCGC TTGCCGAGGG CGCGCCGCTG CGCGTGGCAT CCGTCGACGC GGGCCGGCTC
GAAGCGCTGA ACGGCACCGG CCGCTGGCAG TTTCGCGGCG AAGATTCGAT CCGCCAACTG
GCGCAGCGTC TGCAAGCCGG TCCGGGCCTG CGCGAGGTGC CGGTGCCGCG CGGCCTGAAG
GCCGAATTGC GGACCTATCA GCAGCAAGGC CTGAACTGGA TGCAGTTTCT GCGCGAACAG
GATCTGGCTG GCGTGCTCGC CGACGACATG GGTCTGGGCA AGACCGTGCA GACGCTCGCG
CATATCCTCG CGGAGAAAGA AGCGGGGCGT CTCGACCGGC CCGCGCTGAT CGTCGTGCCG
ACCACGCTCG TGCACAACTG GCGCGAGGAA GCGCGCCGCT TCGCACCCGA ACTGAGAGTG
CTGGTGCTGA ACGGCCCGCA GCGCAAGGAG CGCTTCGAGC AGATCGGCCA ACACGAGCTG
ATCCTGACCA CGTACGCGCT GCTGTGGCGC GATCAGAAAG TGCTCGCCGA GCATGACTAT
CACCTGCTGA TCCTCGACGA GGCGCAGTAC GTAAAGAACG CCACCACCAA AGCCGCCCAG
GCGATACGCG GGCTGCGCGC GCGGCATCGG CTGTGTCTGA CGGGCACGCC GCTGGAGAAT
CATCTCGGCG AGCTGTGGTC GCAGTTCGAT TTTCTGTTGC CGGGGTTTCT CGGCAGCCAG
AAAGACTTCA CCAAACGCTG GCGCAATCCG ATCGAGAAGA ACGGCGACGG CGTGCGCCGC
GCGTTGCTGG CGCGCCGCAT CCGGCCATTC ATGCTGCGCC GTCGCAAGGA CGAGGTCGCC
AGGGAGTTGC CGGCCAAGAC GACGATCCTG TGCTCCGTGG ACCTGGAAGG AGCGCAGCGC
GATCTGTACG AAACCGTGCG CACGGCGATG CAGGAGAAAG TGCGCGCCGC GGTCAGCGCG
CAAGGGCTCG CGCGCAGCCA TATCATCGTG CTCGATGCTC TGCTGAAGCT GCGCCAGGTG
TGCTGCGATC CGCGCTTGGT CCGCATGCTC AAGGCGGCGG GCGATGCGCA TGAGACGCAC
GACAGGACGG ACAGGGTCGA GAAGGGCGCG CGCGCCATGC GTTCAGCCAA GCTCGACCTG
CTTCTGTCGA TGTTGCCGGA GCTGATCGAG GAAGGACGCC GCGTGCTGTT GTTCTCGCAG
TTCACCGGCA TGTTGTCGCT GATTGCCGAA GCGCTCGAAG AAGCCGCGAT TCCCTATGTC
ATTCTCACCG GCGACACGGC GGATCGCGTC ACGCCGGTCG AGCGTTTCCA GCAAGGCGAG
GTGCCGCTCT TCCTGATCAG CCTGAAGGCG GGCGGCGTGG GCCTGAACCT GACCGCCGCC
GACACGGTGA TCCACTACGA CCCGTGGTGG AACCCGGCTG CCGAGAATCA GGCGACGGAC
CGCGCGCATC GGCTGGGACA GGACAAGCCC GTGTTCGTGT ACAAGCTGAT CGCGGCGGGC
AGCATCGAGG AAAAGATCGT GGAATTGCAG GAGCAGAAGG CGGGACTCGC CGACAGCATT
CTTTCCGAAG ATGCCGCCGG CGCCGCCAAG TTCTCGGACG ACGATCTCGA CGCGCTGTTC
GCACCCATGC CGGAAATTGA AAGCGGCAGA TGA
|
|---|
| Protein sequence | MSSVFFDRDR IAEWLGEHTV AKARSVGPVT HVQWHGSTLS GEVQGTQPLP YKTRVRFRTD
GGSPWAQGEC SCPVGRNCKH VAALLFAELD YHDEMDHVTH VRLDDEGETA RGLAREPMAN
PGSPAGVRPE LVSWLERFRA RAEAADADAQ KASAPRTQTL AYRLTWSRFH MRHEVVLYRA
RCNPDGAIVD VAEPWGNVEA ALLKQPKFVS DEDLSILRGL WLGRSREDFG QFILRGTSGA
EMLQKLIATG RLFVDFTPGS GHDGPIPLSR GADRAGRIEW EPLADERLRP VLRTEPRASM
VLPTEPVWYV DGIANEAGIV QSSLPFQQLP DYLAMPPISL AEAPLVASVL REIAPELPLP
PTHDASAIRV IDVDPVPVLT LNSHALPSAA SKAGLRQAAA VELAGVSFDY DGVSINVDSS
VTLVPMPGGD VIHIRRRYEA EKKRLLELRK TGLQKVPTSR VHASRLLPDT MLGLPDAEAW
SAFVNDSVPE LVSKGWRVTM APEFRYNVIE IDAIEGTAHQ AGDGWFDLEM GIRIGERNVR
LEPLLADLFR RDRRWLSGAL ESIRDDEPIE LKTEENKRLR LRADRLKPVV RVLVDLFDAL
GGSLAEGAPL RVASVDAGRL EALNGTGRWQ FRGEDSIRQL AQRLQAGPGL REVPVPRGLK
AELRTYQQQG LNWMQFLREQ DLAGVLADDM GLGKTVQTLA HILAEKEAGR LDRPALIVVP
TTLVHNWREE ARRFAPELRV LVLNGPQRKE RFEQIGQHEL ILTTYALLWR DQKVLAEHDY
HLLILDEAQY VKNATTKAAQ AIRGLRARHR LCLTGTPLEN HLGELWSQFD FLLPGFLGSQ
KDFTKRWRNP IEKNGDGVRR ALLARRIRPF MLRRRKDEVA RELPAKTTIL CSVDLEGAQR
DLYETVRTAM QEKVRAAVSA QGLARSHIIV LDALLKLRQV CCDPRLVRML KAAGDAHETH
DRTDRVEKGA RAMRSAKLDL LLSMLPELIE EGRRVLLFSQ FTGMLSLIAE ALEEAAIPYV
ILTGDTADRV TPVERFQQGE VPLFLISLKA GGVGLNLTAA DTVIHYDPWW NPAAENQATD
RAHRLGQDKP VFVYKLIAAG SIEEKIVELQ EQKAGLADSI LSEDAAGAAK FSDDDLDALF
APMPEIESGR
|
|---|
| |