| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1660 |
|---|
| Symbol | |
|---|
| ID | 4007846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1532334 |
|---|
| End bp | 1533788 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637951031 |
|---|
| Product | putative peptidoglycan-binding LysM |
|---|
| Protein accession | YP_553656 |
|---|
| Protein GI | 91778448 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0342216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTTT CCGCCGGTGT GGCGCCGCGC GGCAGCGCGG GTTCGCCGGG CCGCCGCGGC
GGCGTGTTGC TTGCTGCCGC CGGCCTGCTC GCAATGGCCT GCTTTGCGCC GGTGTCCGCG
CATGCGCAAT CGTCGCGCGC GCTCAAGGCG CGCACCAAAG CCGCGGCGCC GGTCTATGTC
TCGTACGTGA CCCGCGAAGG CGACACGCTG TACGACATCG CCGGCAACTA CATGCGCGAC
CCGGGCGACT GGGCCGCGCT AAGCCGCCTG AATCACGTGC CCGCGCCACG CCGCATGCCG
GCTGGCATCG TCCTGCGCCT GCCCGCCGAC AGGCTCAAAC AGGAACAGGA ATCGGCCCGT
GTGATCGCGA CGAGCGGCCC GGTCGAGCAC GCGTTCGGCA CGAACCCTTA CGTGCCGCTC
GCGCAAGGCA CGACGCTCGG CGAGGGCGAT CGCATCCGCA CCGGGGAAAA CGGTTTTGTG
ACGCTGGAAT TGCCCGACGG CTCGCACGTC ACAGTGGCGC AGAACGGCCT GCTCGACATC
GGCACGCTGC GGCGTACCAC GCTGACTGGC GCCGGCGATC GCCTGCTCGA ACTGCGCGGC
GGCGAAGTCG AGAGCCAGGT CACGCATGCC ACGAAAAAGG ACGACCGCTT CCAGATCCGC
TCGCCGTCGG TTGTGGCGGG CGTGCGCGGA ACGCGCTTCA AGGTCGCCTA CGACGACAAC
GCGCGAACCA CCGCAATAGA AGTGCTGGAC GGCGCGGTCG GCGTCGACCC GGCCGCGCGC
GCCGGGCACG CGTCCGCGCC GCCGCCCGGC GCGCCGCTAC AGGCCTCCGC TCAGCTCGTG
CCGGCGCGCT TCGGCAGCGT GACGCGGGCG GGCGGAGCGA TTGGCGGCCC GGTCGAGTTG
CTGCCCGCGC CCTCGCTGAC GCAGCCGGCC AGGGTGCAGG ACGGCAAGAC GGTCGCGTTC
GGGCTCGTTC CGTCCGGACA CGCCGTGGCC TACCGCGTGC AGATCGCGCG CGACGCCGAC
CAGCTCGACC TGATCCGCGA TCTGCGCGTG AGCGCGCCGC ATGCCGATTT CGGCGACCTG
GCCGACGGCA CCTATTTCGT GCGGATCGCC GCGATCGACG GCAACGGGCT CGAAGGATTG
CCGCAGGTGT ATGCGTTCGA ACGCCGCCAG TTCGGGCTGG CCGCGTCGGC CAGCCAGCGC
GCCGGCAGCC GCGACTATGA GTTCCGCTGG TTCGTCAGCC GCGCCACGGT CGAGACACGC
TTCCGTTTCG TGCTGGCGAC GACCGACGAT TTGCGCCATC CGCTCGTGGA CCGCACCGAT
CTTTCGGGCG GCCAACTGGT CGTGAGCGAT CTGCCGGCCG GCGTCTACTA CTGGACGATC
GTCGCCGAGC AGTTCGAGAA CGGCCGCTTG TACGAGAAGA GCAGCACGGT GCGTTCGTTT
ACGCTGGCGC GCTGA
|
|---|
| Protein sequence | MTFSAGVAPR GSAGSPGRRG GVLLAAAGLL AMACFAPVSA HAQSSRALKA RTKAAAPVYV
SYVTREGDTL YDIAGNYMRD PGDWAALSRL NHVPAPRRMP AGIVLRLPAD RLKQEQESAR
VIATSGPVEH AFGTNPYVPL AQGTTLGEGD RIRTGENGFV TLELPDGSHV TVAQNGLLDI
GTLRRTTLTG AGDRLLELRG GEVESQVTHA TKKDDRFQIR SPSVVAGVRG TRFKVAYDDN
ARTTAIEVLD GAVGVDPAAR AGHASAPPPG APLQASAQLV PARFGSVTRA GGAIGGPVEL
LPAPSLTQPA RVQDGKTVAF GLVPSGHAVA YRVQIARDAD QLDLIRDLRV SAPHADFGDL
ADGTYFVRIA AIDGNGLEGL PQVYAFERRQ FGLAASASQR AGSRDYEFRW FVSRATVETR
FRFVLATTDD LRHPLVDRTD LSGGQLVVSD LPAGVYYWTI VAEQFENGRL YEKSSTVRSF
TLAR
|
|---|
| |