| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1617 |
|---|
| Symbol | |
|---|
| ID | 4007894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1586465 |
|---|
| End bp | 1587472 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637951077 |
|---|
| Product | benzoate/H+ symporter |
|---|
| Protein accession | YP_553697 |
|---|
| Protein GI | 91778489 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
|---|
| TIGRFAM ID | [TIGR00843] benzoate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.690335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCA TCGGCGCGTG GTCGACACCC GGCGTGGCAT TGCTGATTAC CGGACTTGCT
CACTATCCAT TCGGCGACGT GATCGGCTGT TATCTGGTAG TGACAGTCAT CATCGCAATT
CTTGGCTTGT CGAGTCTGTT CGGCAGACTG ATCCAGCATC TGCCCGCACA TCTTCTGTCT
GCCATGATTG CTGGCGTGCT CTTCGAGTTT TGCGCGGGGA TCTTCCGCTC GCTCCAATCC
ACGCCCGCCG TTGTGCTGCC GGTGATAGTC GCGTACGTCG CCTGTCGGCG CTTCATCCCG
CGTTACGCCG TCGCGCTTGC GCTGCTGACC GGCGTCATCC TGGCTCTGCC GGGCACGAAC
TTCACCGCCC AAGGGCTCGA CCTGACCATC GTCAAGCCCG AACTCACCCT CCCGAGCTTT
TCTGTCGAGG CACTCGTCGG ACTCGGCCTG CCGTTGCTTC TGCTCGCCCT GACCCAATAC
GCAACCTCGA TCCATATTCT TCGTAACGCG GGTTATGACA TATCGCCCAA ATCGGTCGTT
GGCGCCAGCG GACTCATGTC GATTCCTCTC GCCTTGTTCG GCAACTCCGG CATCAACCCT
GCGGCAATCG TCGGGGCCAT GTGCGCGAGC CCGGAATGCC ACGAGAATCC CCAGCGCAGA
TATATCTCCG GCGTGGTCTG TGGCGTCGGT TACCTCTGCG TCGGCACGTT TGGCGCTTCC
GTCATCGCGC TCTTCGCGCG GCTGCCCGCG GGGCTCACCA GTACCCTGGC GGGTCTGGCG
CTGCTCGGAA CACTCGTCAC AAGTCTCTCA TCGTCGGTCG CTGCCGAGGC CGATCGCGAA
TCCTCTGTCA TTACGTTCGT GGCCACCGTT TCCGGCATGT CGTTCTTCGG CTTGGGGTCG
GCCTTGTGGG GACTCGTCGC CGGTGTCGTT TTTTCGCTCG TCTTGTCGAA GAAGCCACTC
TGGAGGCCTG CGAAGCGGGC CGATGCCAAC GAGCCGAAAA CCAGTTGA
|
|---|
| Protein sequence | MPVIGAWSTP GVALLITGLA HYPFGDVIGC YLVVTVIIAI LGLSSLFGRL IQHLPAHLLS
AMIAGVLFEF CAGIFRSLQS TPAVVLPVIV AYVACRRFIP RYAVALALLT GVILALPGTN
FTAQGLDLTI VKPELTLPSF SVEALVGLGL PLLLLALTQY ATSIHILRNA GYDISPKSVV
GASGLMSIPL ALFGNSGINP AAIVGAMCAS PECHENPQRR YISGVVCGVG YLCVGTFGAS
VIALFARLPA GLTSTLAGLA LLGTLVTSLS SSVAAEADRE SSVITFVATV SGMSFFGLGS
ALWGLVAGVV FSLVLSKKPL WRPAKRADAN EPKTS
|
|---|
| |