Gene Bxe_B1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1598 
Symbol 
ID4007913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1604122 
End bp1607124 
Gene Length3003 bp 
Protein Length1000 aa 
Translation table11 
GC content65% 
IMG OID637951096 
Productsarcosine oxidase, alpha subunit, heterotetrameric 
Protein accessionYP_553716 
Protein GI91778508 
COG category[E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.898229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA AAGACCGACT CCCCAACGGC GGGCGCATCA ATCGCGCGAT GCCGCTGACG 
TTCACGTTCA ACGGCCGCCA GTACCAGGGC TATCAGGGTG ACACGCTGGC TTCGGCGCTG
CTCGCGAACG GCGAGCATTT CGTGGCGCGT AGCTGGAAGT ATCACCGGCC GCGCGGCATC
GTCACGGCAG GCGTGGAAGA GCCGAATGCC GTGGTGCAAC TCGAAACCGG CGCCTACACG
GTGCCGAATG CGCGCGCCAC CGAAGTCGAG TTGTACCAGG GGCTCGTCGC CACCAGTGTG
AACGCGAAGC CGAGCATCGA AAAAGACCGC ATGGCGGTCA ACCAGAAGAT CGCGCGCTTC
ATTCCGGCGG GCTTCTATTA CAAGACCTTC ATGTGGCCGC GCAAATTCTG GCCGAAGTAC
GAAGAAGTGA TCCGCGACGC GGCCGGTCTC GGCAAGGCGC CGGAACACAC CGACGCGGAC
CGCTACGACA AGTGCTTTGC GCATTGCGAC GTGCTGGTGG TGGGCGGCGG CCCGACCGGC
CTTGCGACCG CGCACGCAGC CGCGTTGTCC GGCGCGCGCG TGACGCTGGT CGACGATCAG
CCGGAACTCG GCGGCTCGCT GCTGTCGTGC CGCGCGGAGA TCGACGGCAA GCCCGCGCTG
AACTGGGTGC ACAAGATCGA AGACGAACTG CGGCAAATGC CCGACGTGAA AATCCTGTGC
CGCAGCACGG CGTTCGGCTA TCAGGACCAC AACCTCGTGA CGGTCACGCA GCGGCTCACC
GAGCATCTGC CGGTATCGCA GCGCAAGGGC ACGCGCGAAC TGATGTGGAA GATCCGCGCG
AAACGGGTGA TTCTCGCGAC CGGCGCGCAT GAACGGCCCA TCGTGTTCGG CAACAACGAT
CTGCCGGGCG TGATGCTGGC GTCGGCCGTG TCGACCTATC TGCATCGCTA TGCGGTGCTG
CCGGGCCGCA ACGCGGTGGT CTTCACGAAC AACGACGACG GCTACCAGTG CGCGCTCGAT
CTGAAAGCGG CCGGCGCCCA GGTGACGGTG GTCGATCCGC GCGCGGGCGA ATCGAAGGGC
ACGCTGCCGG CGCTCGCAAG GCGCTATGGC GTCAAGGTGA TGAGCGGCAC GGTGATCACT
GCGGCGCACG GCAAACTGCG CGTGGCTTCG GTCGAACTGG CGTCGTATTC GAACGGACAG
GTCGGTGCGA AGCAGGGCGA GCTGTCGTGC GATCTGCTCG CCATGTCCGG CGGCTGGAGT
CCGGTGCTGC ACCTGTTCGC GCAATCGGGC GGCAAGGCGC ACTGGCATGA CGGGAAGGCC
TGCTTCGTGC CGGGCAAGGC GATGCAGGCG GAAACGAGCG TCGGCGCCTG CGCCGGCGAC
TTCACGCTCG GCCAGGGCAT CCGCTTTGCG GTGGATGCGG GCGTCGAGGC GGCGCGCGCG
GCGGGCTTCA TCGTGGCACG GCCGAATCCG GTGCAGGTGG CCGAGATCAC GGAAGCGACG
ATGCTGCCGC TGTGGCTGGT CGGCGGCCGC GAACTGGCCA CGCGCGGGCC GAAGCAGTTC
GTCGACTTCC AGAACGACGT GTCGGCCGCG GATATTTTCC TCGCGGCGCG CGAAGGGTTC
GAATCGGTCG AACACGTGAA ACGCTATACG GCAATGGGTT TTGGCACCGA CCAGGGCAAG
CTCGGCAACA TCAACGGCAT GGCGATTCTC GCGCAGGCGC TCGGCAAGAC GATTCCCGAA
ACCGGCACGA CCACGTTCCG GCCGAACTAC ACGCCGGTCA GCTTCGGCAC GTTTGCCGGC
CGCGAGCTGG GCGAGTTTCT CGACCCGGTG CGCAAGACGG CGGTGCACGA ATGGCACGTG
GAAAACGGCG CGGCCTTCGA GGACGTGGGC AACTGGAAGC GCCCGTGGTA CTACCCGAAA
GCCGGCGAAG ATCTGCACGC GGCAGTGGCG CGCGAATCGC TCGCGGTGCG CACGAGCGTC
GGCATTCTCG ACGCCTCCAC GCTCGGCAAG ATCGACATTC AGGGTCCCGA TTCGGCGAAA
CTGCTGAACT GGGTCTATAC GAATCCGTGG AGCAAGCTGG AAGTCGGCAA GTGCCGCTAT
GGTCTGATGC TCGACGAAAA CGGCATGATT TTCGACGACG GCGTGACCGT ACGCCTCGCC
GACCAGCACT ACATGATGAC CACCACCACC GGCGGCGCGG CGCGCGTGCT GACGTGGCTC
GAACGCTGGC TGCAAACCGA ATGGCCGGAC ATGCGCGTGC GGCTCGCGTC GGTCACGGAC
CATTGGGCGA CCTTCGCCGT GGTCGGTCCG AACAGCCGCA AGGTGCTGCA GAAGGTTTGC
CAGGACATCG ACTTCGCCAA CGCGGCGTTC CCGTTCATGA GCTATCGCGA AGGCACGGTC
GCGGGCGCCG CGTCGCGTGT GATGCGCATC AGCTTCTCGG GCGAGCTCGC CTATGAGGTG
AACGTGCCGG CGAACGTCGG ACGCGCGGTG TGGGAAGCGC TGATGGCCGC GGGCGCGGAA
TTCGACATCA CGCCGTACGG CACCGAAACC ATGCACGTGC TGCGCGCGGA GAAGGGCTAC
ATCATCGTCG GCCAGGATAC GGACGGTTCG ATGACGCCGT ACGACCTCGG CATGGGCGGG
CTGGTTGCCA AGTCCAAGGA CTTTCTCGGC AAGCGTTCGC TGACCCGCTC GGACACGGCG
AAGGCAGGAC GCAAGCAACT GGTCGGCCTG CTTTCGGACG ACCCGTCGTT CGTGATACCC
GAAGGCTCGC AGATCGTCGC GGGTCCGTTC CAGGGCGACA CGGCGCCGAT GCTCGGCCAC
GTCACGTCGA GCTACTACAG CCCGATCCTG AAGCGCTCGA TCGCGATGGC GGTCGTGAAG
GGCGGTCTCG ACAAGATCGG CGAGACGGTC ACGATTCCGC TTGCGAGCGG CAAACAGATT
GCAGCGAAGG TCACCAGTTC GGTGTTCTAC GACAGCGAAG GAGCACGTCA ACATGTGGAA
TGA
 
Protein sequence
MSQKDRLPNG GRINRAMPLT FTFNGRQYQG YQGDTLASAL LANGEHFVAR SWKYHRPRGI 
VTAGVEEPNA VVQLETGAYT VPNARATEVE LYQGLVATSV NAKPSIEKDR MAVNQKIARF
IPAGFYYKTF MWPRKFWPKY EEVIRDAAGL GKAPEHTDAD RYDKCFAHCD VLVVGGGPTG
LATAHAAALS GARVTLVDDQ PELGGSLLSC RAEIDGKPAL NWVHKIEDEL RQMPDVKILC
RSTAFGYQDH NLVTVTQRLT EHLPVSQRKG TRELMWKIRA KRVILATGAH ERPIVFGNND
LPGVMLASAV STYLHRYAVL PGRNAVVFTN NDDGYQCALD LKAAGAQVTV VDPRAGESKG
TLPALARRYG VKVMSGTVIT AAHGKLRVAS VELASYSNGQ VGAKQGELSC DLLAMSGGWS
PVLHLFAQSG GKAHWHDGKA CFVPGKAMQA ETSVGACAGD FTLGQGIRFA VDAGVEAARA
AGFIVARPNP VQVAEITEAT MLPLWLVGGR ELATRGPKQF VDFQNDVSAA DIFLAAREGF
ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AQALGKTIPE TGTTTFRPNY TPVSFGTFAG
RELGEFLDPV RKTAVHEWHV ENGAAFEDVG NWKRPWYYPK AGEDLHAAVA RESLAVRTSV
GILDASTLGK IDIQGPDSAK LLNWVYTNPW SKLEVGKCRY GLMLDENGMI FDDGVTVRLA
DQHYMMTTTT GGAARVLTWL ERWLQTEWPD MRVRLASVTD HWATFAVVGP NSRKVLQKVC
QDIDFANAAF PFMSYREGTV AGAASRVMRI SFSGELAYEV NVPANVGRAV WEALMAAGAE
FDITPYGTET MHVLRAEKGY IIVGQDTDGS MTPYDLGMGG LVAKSKDFLG KRSLTRSDTA
KAGRKQLVGL LSDDPSFVIP EGSQIVAGPF QGDTAPMLGH VTSSYYSPIL KRSIAMAVVK
GGLDKIGETV TIPLASGKQI AAKVTSSVFY DSEGARQHVE