Gene Bxe_B1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1540 
Symbol 
ID4007971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1668973 
End bp1670163 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID637951154 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_553774 
Protein GI91778566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCAGC TTCCGATGTC CCGCCGCGAG TGGCTCAAGC TCGCTTCGAT GTTCACCGTC 
GCCGGCGCCG GGCCGTTGCT TGGCGCGCTC AACGCGCGAG CCGCCACGGA CCCGAACGCG
CCCGTGCGCA TCGGCTATCT GCCAATCACC GACGCCACGC CTTTGCTGGT CGCCCATAAC
AACGGCTATT TCGAAGCGGC GGGCCTCGCC GTCGAGAAAC CGACGCTGCT GCGCAGTTGG
GCGCAACTGG TCGAAGCGTT TCTGTCGGGT CAGGTCAACG TGGTACACCT GCTCGCGCCG
ATGACGATCT GGGCACGCTA CGGCAGCCAG GCCCCGGCGA AGGTAGTCGC CTGGAATCAC
GTCAATGGCT CGGCGCTGAC CGTGTCGCCC GACATCGGCA AGGTCGCGGA CCTCGGCGGA
AAAACGGTGG CGGTGCCGTT CTGGTACTCG ATCCATAACG TCGTCGTGCA GGACATGTTG
CGCACGCAAG GACTCGTGCC GGTTCTGAAG AAAGACGGCG AGCTCAAGCC GAACGAAGTC
AGACTCATCG TCATGGCGCC GTCGGACATG CCGCCGGCGC TGGCGTCGAG ACAGATCGCC
GGGTTCATCG TCGCCGAGCC GTTCAATGCG GCGGCCGAAG GGCTGAAAAT CGGCAAGGTG
CTGCGCTTTA CCGGCGATGT CTGGAAGAAC CATGCATGCT GCGTCGTGTT CATGCACGAG
CGGGATCTGA CCGAACGCGC CGCGTGGTCG CAGAAGGTGG TCGATTCGGT GGTGAAGGCG
CAGTTGTGGA CGCGCGCTCA TCCGCAAGAG GCCGCGCAGC TATTGTCGAA AACCGGCCAG
AACCATTACA CGCCGCACAC AGCCGCCGTA TTGACCGAGG TGCTGGCCCC TGCCCCCGGC
GATCAGGGCC GCTATCTGGC CGATCGCGCG ATCATCCATG CGGACTGGCA CGCAAAGCGG
ATCGATTTCC AGCCTTATCC CTATCCCGCC TATACGGAAG AACTGGTTCG CCGCCTGAAA
ACGACTCAGC TCGAAGGCAA TGCGCCGTTC CTGGGCCAAC TCGATCCGGC ATTCGTCGCG
CGCGACCTGG TGGACGACCG TTTCGTGAAA AACAGCATCA AGTCGGCTGG CGGGATGCAG
GCATTTGGCT TGCCGGAAGG TTTTTCGCGC ACGGAGACGA TCGTTGTCTA G
 
Protein sequence
MCQLPMSRRE WLKLASMFTV AGAGPLLGAL NARAATDPNA PVRIGYLPIT DATPLLVAHN 
NGYFEAAGLA VEKPTLLRSW AQLVEAFLSG QVNVVHLLAP MTIWARYGSQ APAKVVAWNH
VNGSALTVSP DIGKVADLGG KTVAVPFWYS IHNVVVQDML RTQGLVPVLK KDGELKPNEV
RLIVMAPSDM PPALASRQIA GFIVAEPFNA AAEGLKIGKV LRFTGDVWKN HACCVVFMHE
RDLTERAAWS QKVVDSVVKA QLWTRAHPQE AAQLLSKTGQ NHYTPHTAAV LTEVLAPAPG
DQGRYLADRA IIHADWHAKR IDFQPYPYPA YTEELVRRLK TTQLEGNAPF LGQLDPAFVA
RDLVDDRFVK NSIKSAGGMQ AFGLPEGFSR TETIVV