Gene Bxe_B1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1526 
Symbol 
ID4007985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1683046 
End bp1684416 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content65% 
IMG OID637951168 
Productmajor facilitator superfamily tartrate/H(+) symporter 
Protein accessionYP_553788 
Protein GI91778580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.674895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC CTTCATACGG ACCCGAATCC GGACCCGCCG CCGCCGGCAG CGCGGCCGAT 
CCTCACAACG CCGCGCTCTA CGCCAAGCTC ACGCGGCGCA TCGTGCCGTT TCTGTTTCTC
GCATTCGTCG TCGCGTATAT CGACCGCGTG AACGTCAGCT TCGCAAAACT GCAGATGCTC
AGCGACCTGT CGCTGAGCGA AACCGTGTAT GGGGCCGGCG CGGGGATTTT CTTCGTCGGC
TATTTTTTCT TTGAAGTGCC GAGCAACCTG ATCCTGAACC GGGTCGGCGC GCGCCGCTGG
ATCGCGCGGA TCATGGTCAC GTGGGCGATC GTGTCGGGCT TGACGATGTT CGTCAGCGGC
CCGACATCGT TCTATATCAT GCGCTTTCTG CTCGGCGTCG CCGAAGCGGG ATTTTTCCCC
GGCATTCTGC TGTATCTGTC CAACTGGTTT CCGTCGACGC GGCGCTCGCA GATCATCGCG
CTTTTCATGA CCGCGATTCC GGTGTCCGGC GCGATCGGCG GCCCGTTGTC GGGCTGGCTG
ATGGCGCATT TCGCGGGCAC CTACGGTCTC GCCGGATGGC GCTGGCTGTT TCTGGTCGAA
GGGATCGGCT CGCTGGCGGT CGGCATCGCG GCGTTCTTCG TCCTGCACGA CAGGATCGAC
AATGTGCGCT GGCTGAACGC CGACGAAAAA TCGCGCCTTG CCGCCGATCT CGCCCGCGAC
GCGATCACGC GCACCGAAAC CTCGGCGCGC GGCGCATTCG CCAGCAAGCG CGTGTGGCTG
CTCGGGCTGC TGTACTTCTG CATCGCAATG GGCAATTACG GTCTCGCGTT CTGGGTGCCG
ACCATCATCA AGGCAAGCGG CGTTGCCAGC GTGGGCAACA TCGGCTGGCT GTCGGCGGTG
CCGTCGCTGA TCAGCGCAGT CGCGATGGTG CTGATCGCGC GTCACGCGGA CCGTCACGAC
GAACGCCGCG TGCATGTCGC GGTCTGCTGT GCGATCGGCG CGCTCGGTTT GCTGGCGTCG
GTGCTGTTTG CGTCGAATGT CGCGGTATCG ATCGCGGCGC TGATCGTCGC GGCGATCGGC
ATCAATTCGA TCGCGCCGGT GTTCTGGGGC ATTCCGACCG CCCTGCTCGG CGGCGCGGGC
GCGGCGGCGG GCATCGCCGT GATCAACTGC ACCGGCAATC TGGCCGGCTT CGTGAGTCCG
TTCATCGTCG GGCGGCTGTC CGATCTGAGC GGCGGCAAGC TGTTGCCGGG AATGTTCGCC
ATCGCCGTGG CGCTGTTGAT CGGCGCGGCG ATCGTGCTGC GCATGCCGCT CAGGCGCGCT
TCCGCTTCTG CGGCGAGCGC GCCTGATTCC AGCATTCCAC AGAGGACTTG A
 
Protein sequence
MSVPSYGPES GPAAAGSAAD PHNAALYAKL TRRIVPFLFL AFVVAYIDRV NVSFAKLQML 
SDLSLSETVY GAGAGIFFVG YFFFEVPSNL ILNRVGARRW IARIMVTWAI VSGLTMFVSG
PTSFYIMRFL LGVAEAGFFP GILLYLSNWF PSTRRSQIIA LFMTAIPVSG AIGGPLSGWL
MAHFAGTYGL AGWRWLFLVE GIGSLAVGIA AFFVLHDRID NVRWLNADEK SRLAADLARD
AITRTETSAR GAFASKRVWL LGLLYFCIAM GNYGLAFWVP TIIKASGVAS VGNIGWLSAV
PSLISAVAMV LIARHADRHD ERRVHVAVCC AIGALGLLAS VLFASNVAVS IAALIVAAIG
INSIAPVFWG IPTALLGGAG AAAGIAVINC TGNLAGFVSP FIVGRLSDLS GGKLLPGMFA
IAVALLIGAA IVLRMPLRRA SASAASAPDS SIPQRT