| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1511 |
|---|
| Symbol | |
|---|
| ID | 4008000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1716762 |
|---|
| End bp | 1717838 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637951183 |
|---|
| Product | ABC spermidine/putrescine transporter, ATPase subunit |
|---|
| Protein accession | YP_553803 |
|---|
| Protein GI | 91778595 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.280689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.146459 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAC GAGCGAAAAC AGGTGTTTCA ATCCGATCGG CAGCGAAACG TTATGGCCAC
GTGGTGGCAC TCGACGACGT TTCGCTCGAC ATCGCCCCCG GCGAATTCGT CTCGCTGCTC
GGCCCTTCGG GATCGGGCAA GACCACCCTG CTCGGCATTC TCGGCGGTTT CGTGCAGCCC
AGTTCGGGGG CGGTGTGGGT CGGCGAGCGC GACATTACAT TTGCGCCGCC GCACAAACGC
GACATCGGCA TCGTGTTTCA GAACTACGCG CTGTTTCCGC ATATGAACGT GGGCGAGAAC
GTAGCGTTTC CGCTGCGCGC GCGGCGTCAG CCGAAAGCGA CGTGGGCAAA GAAGGTTGCC
GACGCGCTCG CGATGGTCGA ACTCCCCGGC TACGAGAATC GCGGCATCGG CCAGCTGTCG
GGCGGCCAGC GCCAGCGCGT GGCGCTCGCC CGCGCGATGG TGTTCGAGCC GCAACTGATC
CTGATGGACG AGCCGCTCTC CGCGCTCGAC AAGCAGTTGC GCGAAACCAT GCAGATCGAG
CTGCGGCGGC TGCATCGCAG GCTCGGCGCG ACGATCGTCT ACGTGACGCA CGACCAGCGC
GAGGCGCTCA CCATGAGCGA CCGCGTGGCC GTGCTGAAGA ACGGCCGCCT CGTGCAGATC
GATACGCCTG AGCGGCTCTA CGACCGCCCC TGCGACGCGT TCGTGGCGAG CTTCATCGGC
GAAGCGACCC TGCTCGCCGT GACGCGCGCC GGCGACGACG CGGTGCGTCT CGGCGATACG
GTGCTGCGCA CCGCACACCC GCTGCCGCAC GGCGACAGGC TGCTGCTCGC GGTGCAGACC
GAGAAGCTCG TGATCGATAG CGGCGAGCCG CGCGCGGGCG TGAACCGTCT GTCGTGCCGG
GTCACCGAGG TGCTGTATCA GGGCGAAAGC CTGCGCGTGT TCGCGACCCT CGCCGACGGC
ACCGCCATCA GCCTCAGACA GCCTGGCGGG CACGACGCGC GCCGGCGCAT TCCCGAGCCC
GGCGCGCCGA TGAACGTCGT ACTCGATCCG CAGGACACGA TCGTCGTGCC CGCCTGA
|
|---|
| Protein sequence | MDARAKTGVS IRSAAKRYGH VVALDDVSLD IAPGEFVSLL GPSGSGKTTL LGILGGFVQP
SSGAVWVGER DITFAPPHKR DIGIVFQNYA LFPHMNVGEN VAFPLRARRQ PKATWAKKVA
DALAMVELPG YENRGIGQLS GGQRQRVALA RAMVFEPQLI LMDEPLSALD KQLRETMQIE
LRRLHRRLGA TIVYVTHDQR EALTMSDRVA VLKNGRLVQI DTPERLYDRP CDAFVASFIG
EATLLAVTRA GDDAVRLGDT VLRTAHPLPH GDRLLLAVQT EKLVIDSGEP RAGVNRLSCR
VTEVLYQGES LRVFATLADG TAISLRQPGG HDARRRIPEP GAPMNVVLDP QDTIVVPA
|
|---|
| |