Gene Bxe_B1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1510 
Symbol 
ID4008001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1717922 
End bp1718635 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID637951184 
ProductHAD family hydrolase 
Protein accessionYP_553804 
Protein GI91778596 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0822066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0822961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA CCGATTTCAA GGTCCTGACG TTCGACGTCG TCGGCACGCT CATCGACTTC 
GAGCGCGGCG TACTCGGCTC CGTGCGCCGC CTGGGCGGCC CGGCCGCGAA AGACCTGACC
GACGACCAGA TCTTCGAGCC GTACCTGCGC GGCCGTGCGG CCTACCCCGG CCGTTCGAGC
CATGAAATGG CGAACGTCTA CCTGTCGCTG GCGAAGGAAC TCGGTCTGCC CGACGACCCG
CAATCGGCTG CCGCCTTCCA GCGCGACGTG CTCGAATGGC CGGCGTTCGC CGATTCGGTC
GCGGCGCTCA AGCGTCTGCG CAAACACTTC CGCCTGGTTG CCATGACCAA TGCGGACCGC
GTGGCGCTGT CGGCCTACGC GCACACGCTC GGCGACCCGT TCGACGACAC CGTCTGCTGC
GACGAAACCG GCGTCGCCAA GCCCGATCCG CAATTCTTCG CGTACAACCG CGGCCGTCAG
GCGGCGTTCG GCTACAAGTT CGGCGAAATC CTGCACACCG CGCAGAGCCA GTATCACGAC
ATCGGCGTCG CCACCCGGCT TGGCTATGCG ACCTGCTGGA TCGAACGGCG CCAGGGCGTG
AAAGGCTTCG GCGGTACTCC CGTGCCGGAA GCCGTCACCA CGCCGACCTT CAGGTTTGCG
ACGCTCGGCG CGCTCGCGGA CGCCGTCGAA GCCGAAGCAC GCCTCGCCGC CTGA
 
Protein sequence
MKLTDFKVLT FDVVGTLIDF ERGVLGSVRR LGGPAAKDLT DDQIFEPYLR GRAAYPGRSS 
HEMANVYLSL AKELGLPDDP QSAAAFQRDV LEWPAFADSV AALKRLRKHF RLVAMTNADR
VALSAYAHTL GDPFDDTVCC DETGVAKPDP QFFAYNRGRQ AAFGYKFGEI LHTAQSQYHD
IGVATRLGYA TCWIERRQGV KGFGGTPVPE AVTTPTFRFA TLGALADAVE AEARLAA