Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1510 |
Symbol | |
ID | 4008001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1717922 |
End bp | 1718635 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637951184 |
Product | HAD family hydrolase |
Protein accession | YP_553804 |
Protein GI | 91778596 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.0822066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0822961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA CCGATTTCAA GGTCCTGACG TTCGACGTCG TCGGCACGCT CATCGACTTC GAGCGCGGCG TACTCGGCTC CGTGCGCCGC CTGGGCGGCC CGGCCGCGAA AGACCTGACC GACGACCAGA TCTTCGAGCC GTACCTGCGC GGCCGTGCGG CCTACCCCGG CCGTTCGAGC CATGAAATGG CGAACGTCTA CCTGTCGCTG GCGAAGGAAC TCGGTCTGCC CGACGACCCG CAATCGGCTG CCGCCTTCCA GCGCGACGTG CTCGAATGGC CGGCGTTCGC CGATTCGGTC GCGGCGCTCA AGCGTCTGCG CAAACACTTC CGCCTGGTTG CCATGACCAA TGCGGACCGC GTGGCGCTGT CGGCCTACGC GCACACGCTC GGCGACCCGT TCGACGACAC CGTCTGCTGC GACGAAACCG GCGTCGCCAA GCCCGATCCG CAATTCTTCG CGTACAACCG CGGCCGTCAG GCGGCGTTCG GCTACAAGTT CGGCGAAATC CTGCACACCG CGCAGAGCCA GTATCACGAC ATCGGCGTCG CCACCCGGCT TGGCTATGCG ACCTGCTGGA TCGAACGGCG CCAGGGCGTG AAAGGCTTCG GCGGTACTCC CGTGCCGGAA GCCGTCACCA CGCCGACCTT CAGGTTTGCG ACGCTCGGCG CGCTCGCGGA CGCCGTCGAA GCCGAAGCAC GCCTCGCCGC CTGA
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Protein sequence | MKLTDFKVLT FDVVGTLIDF ERGVLGSVRR LGGPAAKDLT DDQIFEPYLR GRAAYPGRSS HEMANVYLSL AKELGLPDDP QSAAAFQRDV LEWPAFADSV AALKRLRKHF RLVAMTNADR VALSAYAHTL GDPFDDTVCC DETGVAKPDP QFFAYNRGRQ AAFGYKFGEI LHTAQSQYHD IGVATRLGYA TCWIERRQGV KGFGGTPVPE AVTTPTFRFA TLGALADAVE AEARLAA
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