| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1495 |
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| Symbol | |
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| ID | 4008016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1733593 |
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| End bp | 1735209 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637951199 |
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| Product | ABC peptide transporter, periplasmic ligand binding protein |
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| Protein accession | YP_553819 |
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| Protein GI | 91778611 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.045715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00127227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGG AAAACTCGCA ACATGGCGCT CTTGGACTCG GAAGCGAGTT GGAGCGGCTG
ACGGCCAAAG GTGCCTCGCG GCGCGGCGTG CTGCGCGCGA TGGCCGCAGC CGGGATGATG
TCGGTGACGG GCGCCGGTCT TCTGACCGCT AGCGGTGAGG CCCTGGCGCA AGCCAGGCCG
AAGCAGGGCG GCAAGATCCG TGTGGCGACA CAGTCCGCTT CCGCGGCCGA CACGCTCGAT
CCCGCGAAAG GCGCGCTCGG CACCGACTAC GTTCGTGGCT TCATGTTCTA CAACTGCCTG
ACCGAACTCG ATTCGCATCT CGGCGCGAAG ATGTCGCTCG CCACCTCGCT CGACACGAAA
GACGCCACCG TGTGGGTCGT CAAGCTGCGC AACGGCGTGC AGTTCCACGA CGGCAAAGCC
CTTGCGCCCG CCGACGTGGT GTACTCGATC ATGCGCCACA AAGACCCGGC CACCGCCTCG
AAAGCGAAGA CGCTGGCCGA TCAGATCAAG GAAGTGAAGG CCACCGGCCC GAACGAAGTG
ACGATCACGC TGGAAGGCCC GAATGCCGAT CTGCCCGTGA TCCTCGCCAC CTCGCATTTC
CAGATCATCA AGGACGGCAC CAAAGATTTC AAAACGGCGA TCGGCACCGG CCCGTTCAAG
CTCAAGGAAT TCTCGCCGGG CGTGCGCACG GTCGGTGTGA GAAACGAGAA GTACTGGAAG
CCGGGCATGC CGCACCTCGA CGAAATCGAA CTGATCGGCA TCGGCGACGA ATCGGCGCGC
GTGAACGCGC TGCTTTCGGG CGACGTGCAG TTGATCAACG CGGTAAGCCC GCGTTCGACG
ACCCAGATCA AGGGCGCCGG CGGTTTCTCC GTGCTGGAGA CGAAGACCGG TCTGTACACC
GACCTGGTGG TGCGCGACGA AGGCGGCATT ACCGGCAACG ACGATTTTCG CCGCGGCATG
ATGTACCTGC AGGACCGCGA GCAGATGCGC CGCGCGATCT TCCAGGGTTA CGGCACGATC
GGCAACGACC AGCCTATCGA CCCGACCAAC AAGTACTACC TGGCCGGCTT GCCGCAGCGT
ACCTTCGATC CGGACAAGGC GAAGTTCCAT TTCCAGAAGG CGAAGGTCGG CAGCGCGCCG
ATCCAGATTT TCGCCTCGCC GGCGGCCGAA GGCTCCGTTG AAATGGCCAT GTTCCTGCAG
CAGGTCGCGC CGCAAGCCGG TCTGAATCTG CAGGTCTCGC GCGTGCCGGC CGACGGCTAC
TGGTCGAACC ACTGGATGAA GCATCCGCTG GGCTTCGGCA ACGTCAACGC GCGTCCGAGC
GCCGACGTGA TCTTCACGCA GTTCTTCAAG TCGGACGCAC CGTGGAACGA AGCGAACTGG
AAAAGCCCGA AGTTCGACCA GTTGCTGCTT CAGGCGCGCG GCGAACCGGA CGACGCCAAA
CGCAAGAAGA TCTACGGCGA CATGCAGGTG CTGGTGCATG AAACCGGCGG TGTCGGCATT
CCTCTCTTTC AGAGTTCGCT CGACGCGTAT ACGGACAAGC TCAAGGGCCT CGGCTCGATT
CCGCTCGCCG GGCTGATGGG CTTCATGTTC GCGGAAAACG TCTGGCTCGA AACCTGA
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| Protein sequence | MNKENSQHGA LGLGSELERL TAKGASRRGV LRAMAAAGMM SVTGAGLLTA SGEALAQARP
KQGGKIRVAT QSASAADTLD PAKGALGTDY VRGFMFYNCL TELDSHLGAK MSLATSLDTK
DATVWVVKLR NGVQFHDGKA LAPADVVYSI MRHKDPATAS KAKTLADQIK EVKATGPNEV
TITLEGPNAD LPVILATSHF QIIKDGTKDF KTAIGTGPFK LKEFSPGVRT VGVRNEKYWK
PGMPHLDEIE LIGIGDESAR VNALLSGDVQ LINAVSPRST TQIKGAGGFS VLETKTGLYT
DLVVRDEGGI TGNDDFRRGM MYLQDREQMR RAIFQGYGTI GNDQPIDPTN KYYLAGLPQR
TFDPDKAKFH FQKAKVGSAP IQIFASPAAE GSVEMAMFLQ QVAPQAGLNL QVSRVPADGY
WSNHWMKHPL GFGNVNARPS ADVIFTQFFK SDAPWNEANW KSPKFDQLLL QARGEPDDAK
RKKIYGDMQV LVHETGGVGI PLFQSSLDAY TDKLKGLGSI PLAGLMGFMF AENVWLET
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