| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1473 |
|---|
| Symbol | |
|---|
| ID | 4008038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1754747 |
|---|
| End bp | 1755244 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637951221 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_553841 |
|---|
| Protein GI | 91778633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02935] probable nitrogen fixation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.554599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000104665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG CCACCGCTGA ATCATCCGTA GTTCCGGGCA CGGCCAGCGA CGAAACGCTG
CTGGCGACGC CGTTCGTGCA ACATCTGGTC AAGCAGTTGC GTGCGCAGGA CACGCACGGC
GCGTGGGACG GCAAGTCCGA CCTGCAACTG CTCAAGCCGT ACATTCACAC GGCGGAGGAA
CGCCGCGCGA TTCCGATCAT GGGCGACCCC GATCCCGAAA CGCTGTGGCG GCTCGAAATT
TTCTACAGCG CGATCGCGGT GGCGATCGAG CGTCAGACCG GCCAGATGGT CTCGCCGATG
ATGAAGATGA GCCACGAGGG CTTTGGCCGC ATGGTGTTGA TCGCCGGTCG GCTGGTTGTC
GTCAACAAGC AGTTGCGCGA CGTGCACCGG TTTGGCTTCG CGTCGCTGCA GAAGCTCGCC
GAGGCGGGCG GCAAGTTTCT CGACGAAGCG GTCGGGATGA TCAGGACGTA TCCTGCCGTC
GCACAGTACG GCGCCTGA
|
|---|
| Protein sequence | MAEATAESSV VPGTASDETL LATPFVQHLV KQLRAQDTHG AWDGKSDLQL LKPYIHTAEE
RRAIPIMGDP DPETLWRLEI FYSAIAVAIE RQTGQMVSPM MKMSHEGFGR MVLIAGRLVV
VNKQLRDVHR FGFASLQKLA EAGGKFLDEA VGMIRTYPAV AQYGA
|
|---|
| |