| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1438 |
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| Symbol | |
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| ID | 4008073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1783809 |
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| End bp | 1784945 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951256 |
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| Product | putative homocitrate synthase |
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| Protein accession | YP_553876 |
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| Protein GI | 91778668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.0435894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0132652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATC CGATCATCAA CGACACCACG CTGCGCGACG GCGAGCAGAC GGCCGGCGTC
GCCTTCACGA TTGCCGAAAA ATGCGCGATT GCCGAGGCGC TCGCACGCGC CGGCGTACCC
GAATTGGAAA TCGGTATCCC CGCGATGGGT GACGAGGAAA TCGATTGCAT CCAGACCATC
GTCGCGCTGA ATCTCGACGC CGATCTGATG GTCTGGGGCC GCCTCACCGA TGCGGACCTG
GCCTCGGCGC TGCGCTGCAA TCCCGACATC GTCCACCTGT CGATTCCCGT TTCCGATATC
CACCTGCAAC ACAAGCTGCG CCAGCCGCGC TCATGGGTAT TGGCGCAGAT CAATCGCGTG
ATCGGCGCCG CTGTCAGGAG CGGGCGCAAG GTTTCGCTGG GCGCGGAGGA TGCCTCCCGC
GCGGACCCGG CTTTCCTCGC CGACGTGGCG CGGCGCGCGC AACAGTGCGG CGCGCAGCGC
ATCCGCTTTG CGGACACGCT CGGCGTTCTC GATCCGTTTT CGACCTATGA AGCGATAGCG
CGATTGCGCG ACGCGGTGGA TCTGGAAATC GAAATCCACG CGCACAACGA TCTCGGACTC
GCGACCGCGA ACACGCTTGC CGCGCTGCGC GCCGGCGCGA CCCACGCCAA TACGACCGTC
AACGGTCTGG GCGAACGGGC CGGCAATGCG GCACTGGAAG AAATCGTGAT GGGCGTGCGC
CATATCATGG GCCGCGATAC CGCCGTCGAC ACGACCGCGT TGCTGGGCAT CTCGCGTCTC
GTCGAACGGG CTTCGGGACG CCCGGTCGCG TTGAACAAGA GCATTGTCGG CGGCGGCGTA
TTCACGCACG AGTCGGGCAT CCACACAGAC GGGCTCGCCA AGAATGCCTC GACTTACGAG
AGCTTCGACC CCGCCGAACT CGGCCGCGAG CGCTCGGTCG TGCTCGGCAA GCATTCGGGT
TCGCAAAGCG TGCGCCAGGC TTATGACGCG CTCGGCCTGC CGGTCAGCGA CACGCTTGTC
GCGTTGCTGC TCACGCGCAT CCGCCACCAT GCGACCCATC ACAAGCAGGC GCCCAGCGCC
GCCGACCTGT ATCGCTTCCT GATCGAAGCG CGCGACACCG TGGGAGAGTT GTCGTGA
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| Protein sequence | MSNPIINDTT LRDGEQTAGV AFTIAEKCAI AEALARAGVP ELEIGIPAMG DEEIDCIQTI
VALNLDADLM VWGRLTDADL ASALRCNPDI VHLSIPVSDI HLQHKLRQPR SWVLAQINRV
IGAAVRSGRK VSLGAEDASR ADPAFLADVA RRAQQCGAQR IRFADTLGVL DPFSTYEAIA
RLRDAVDLEI EIHAHNDLGL ATANTLAALR AGATHANTTV NGLGERAGNA ALEEIVMGVR
HIMGRDTAVD TTALLGISRL VERASGRPVA LNKSIVGGGV FTHESGIHTD GLAKNASTYE
SFDPAELGRE RSVVLGKHSG SQSVRQAYDA LGLPVSDTLV ALLLTRIRHH ATHHKQAPSA
ADLYRFLIEA RDTVGELS
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