| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1409 |
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| Symbol | |
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| ID | 4008102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1812499 |
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| End bp | 1813272 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637951285 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_553905 |
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| Protein GI | 91778697 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.0200638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.34398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACC ATTCCATCAA GGGCAAGGTT GCGCTCATAG CCGGTGGCGC GAAAAACCTG
GGCGGCCTGA TCGCCCGCGA TCTCGCCGCC CAGGGCGCGA GAGCCATTGC AATTCACTAC
AACAGTGCCG GCAGCCGGGC GCAAGCCGAT GCCACGGTCG AAGCAATCCG CGCCGCGGGC
GCCGAAGCGG TGGCGTTTCA GGCGGACCTG ACCCGCGCGG GCGCGGTCGA GAAACTGTTC
GCCGATGCGG CGGCCGCGAT CGGCAAGCCT GACATTGCCA TCAACACAGT CGGCAAGGTG
CTGAAAAAAC CGTTTGTCGA GATCAGCGAG GCCGAGTATG ACGAGATGAC CGCGGTCAAT
TCGAAGACCG CTTTCTTCTT TCTCAAGGAA GCGGGCAAGC ACGTCAACGA CAACGGCAAG
ATCGTCACGC TCGTCACGTC TCTGCTCGGT GCATTCACGC CGTTCTACGC CGCGTACGCC
GGCACCAAGG CGCCTGTCGA GCACTACACG CGCGCGGCCG CAAGGGAATA TGGCACGCGC
GGCATTTCGG TCACCGCCGT AGGCCCGGGA CCGATGGACA CGCCGTTTTT TTATCCTGCC
GAAGGCGAAG ACGCGGTCGC TTACCATAAG ACCGCCGCGG CGCTATCATC GTTTTCCAGA
ACGGGCCTGA CCGACATTCA GGACGTGGTA CCGTTTATCC GCCATCTGGT CAGCGACGGA
TGGTGGATCA CCGGCCAGAC CATCCTCGTC AATGGCGGCT ATACGACGAA GTGA
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| Protein sequence | MADHSIKGKV ALIAGGAKNL GGLIARDLAA QGARAIAIHY NSAGSRAQAD ATVEAIRAAG
AEAVAFQADL TRAGAVEKLF ADAAAAIGKP DIAINTVGKV LKKPFVEISE AEYDEMTAVN
SKTAFFFLKE AGKHVNDNGK IVTLVTSLLG AFTPFYAAYA GTKAPVEHYT RAAAREYGTR
GISVTAVGPG PMDTPFFYPA EGEDAVAYHK TAAALSSFSR TGLTDIQDVV PFIRHLVSDG
WWITGQTILV NGGYTTK
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