| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1388 |
|---|
| Symbol | |
|---|
| ID | 4008123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1838324 |
|---|
| End bp | 1839529 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637951306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_553926 |
|---|
| Protein GI | 91778718 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.480209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0990972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA CAACCCGGAT CACTCGGCGC TACGACGTCA TCGGCGACGA AGCTGAATTT
CGCGCGCTGC AGCCCGAATG GGACGCGCTA TGGTCAAAAG CGCAAGGCTA TTGCTATCAG
TCGTTCGCGT TTTGCTGGCT GGCATGGAAG CACGTGTCGA AGCCGCATGG CCGCAAGCTG
AAATGCATTG TGTGCCGCGA AGACGGAAAG CTGGTGATGA TCTGGCCGCT CGAAGCGGTC
AAACGCTCGC TGTGGACCTA TCTCGTGCCG CTCGGCCCGC AAGGCGGCGA CTTCACGAGC
GTGCTGGTCG AGGCCGGCGC AGCCGCCGCG GCGCGCGTGG CGGGCGCGTG GGAGACGGCG
CGCCGGCGGT GCGGCGCCGA CTTCATCCAC CTGCCGTACG TGCGTGAGCG GCTCGAACTG
CACGCGCTGG TGATGCGGGA ACGCAGGATC CTGTTCAGCG AGGCGCACAA CGCGTCCGCC
GCCCGGTTGC GCGGGCAGGG CAGTTGGGAC GCGTACTGCG GGACGCTCGG CACGCTGTTC
GGCAAGCGGC CCGGCGGCTT CGCGAAGAAG TTGTCGAAAG AAGGCACGGT CGCCGTGCGC
ACGCTCGACC CGGCGGAAGA AAGCGAAACG GCATCCATCA TCGAGTGGAT GTTCAAATGC
AAACGGGCGT GGAGCGATCG CGTCGGCAAA CGCAGCGTAT GGCTCGATTT GCCCGAGTTC
GAGCGCTTCC TGGGCAAGCT GATCTATTCG GGCGAGGTGC CCTCGATGGC CCGCCTGATC
GTGGTCACAC TGGACGAAAC ACCGGTGGCC GCGATCATCG CGAGCGTGGG CAATCCGTGG
GCGAGCGCGA TCTTTGCCGG CTTCGACCCG CACTACGGCA AGTTCTGCCC GGGTCTGATC
GCTGTGGAGC AATGCGTGAA ATGGGCGTTC GACAGCGGCT ACGACCTCGA TTTCGGCGTC
GGCACCGAAG ACTTCAAGGC GTACTGGTCG CGCGGCGAAG CGACCACCGC GTGGACCGTG
CAGACCATCA ATTCGAACTG GGGCCTCGCG GCGATTCGCG CGCGGCGCCT GACCCGTGAA
CTGATCGGCC GGGCGAAGAA GCTGCGGCAC GCCGGTGCCG CGGCGCCGCA TGCGGGGGAA
GACGGGGCGC CGCTCGCGCC TGCCATGCAG GCCTCTGCGG AAGCGGGCGG CGCGCACCCT
GAGTAA
|
|---|
| Protein sequence | MDETTRITRR YDVIGDEAEF RALQPEWDAL WSKAQGYCYQ SFAFCWLAWK HVSKPHGRKL
KCIVCREDGK LVMIWPLEAV KRSLWTYLVP LGPQGGDFTS VLVEAGAAAA ARVAGAWETA
RRRCGADFIH LPYVRERLEL HALVMRERRI LFSEAHNASA ARLRGQGSWD AYCGTLGTLF
GKRPGGFAKK LSKEGTVAVR TLDPAEESET ASIIEWMFKC KRAWSDRVGK RSVWLDLPEF
ERFLGKLIYS GEVPSMARLI VVTLDETPVA AIIASVGNPW ASAIFAGFDP HYGKFCPGLI
AVEQCVKWAF DSGYDLDFGV GTEDFKAYWS RGEATTAWTV QTINSNWGLA AIRARRLTRE
LIGRAKKLRH AGAAAPHAGE DGAPLAPAMQ ASAEAGGAHP E
|
|---|
| |