| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1325 |
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| Symbol | |
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| ID | 4008186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1903241 |
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| End bp | 1904884 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951367 |
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| Product | major facilitator superfamily efflux pump outer membrane lipoprotein |
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| Protein accession | YP_553987 |
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| Protein GI | 91778779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.324666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0263416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCC CGCTTGTGAA TTCGCCGTGG TTGACTGCCC GCTTTTCTCC GCTGTCCACA
CTATCCACGC TGTCCGTTGC GATGCTGCTC GCCGCGTGCG CGGTCGGCCC CGACTTTCAC
GCGCCGAAAG CGGACGTGCC TGACCAATGG CGCGACCCGC AACGCAGCGC GGCGATTGCC
ACGGGCGCAT CCGCCGCGAA CGTCGCCTCA GTCCCCACGC TCGATACCGA TCCCGATCCC
CGCTGGTGGC GCAATTTCAA CGACCCGACG CTGGACGCGC TGATCGGGCG TGCCGCGCGC
GGCAACCTGG ATTTGCAGGA GGCGGTGCTG CGCATTGTCG AAGCGCGCAC TCAGGTACAA
AGCGCCGCGT CCCAAGGTCT GCCGAACGTG CGGGCAACCG GCAGTTACCA GCGCGAACAG
CTCGGCGTGA AAGGCTTCCT CGAATCCGAC GGCGTATACG GCAAGGTCGA TCAGCTCGGC
GCGCCGAACT CGCCGGTCAA CGCTATCGCA CCGGGTGCGG GTGCTACGTT GCAAAACGGC
GCGAACAACC TGCTGAATCA ATTGACCGCG CCGGTCAATC TCTGGCAGGC CGGCTTCGAC
GCCTCGTGGG AACTGGATCT GTTCGGCCGC GTGCGCCGCT CGGTGGAGGC TGCCAATGCG
CAAACCGAAG CCGCCGTGGA AAGCCGCAAC GACGCGCTGC TCTCGCTCGA AGCCGAAGTC
GCGCAGACGT ATATGCAATT GCGCGGCGCA CAGGCATTGC ACGCCATTAC GGCGAGTCTC
GTCGACGAAC AGCGCGAGAT CGTCACGTTG ACGCAAAGCC AGGCGAAAGT CGGCCTGACG
AGCGAACTCG ACGTGAAGAG CGCGACGGCG CAACTGGCGC AAACCCAGGC ACAGTTGCCG
CAGTACGAGC AGCAGATTGC CCAGGCGTTG AACGGTCTCG CGTATCTGGT GGGCGAAGCG
CCCGGCGCAC TGGAAGTCGA ACTCGCCGCG CCGGCCGCCG TGCCGCCCGT GCCGCCTGTC
GTGCCGGTGG GTTTGCCGTC CACGCTGGCG CGCCGGCGTC CCGACATTCG CCGCGCGGAG
GCGAGCCTGC ATTCGGCCAC GGCCAATGTC GGCGTGGCCG TGGCGCAGTT CTATCCCGAC
GTGTCCCTGA CTGGCCAGGT GGGAACGCGG GCCACCAATG CGAGCGATCT GTCGCGCTGG
TCGCATCTGT TCTATTCGTT CGGACCGAGC ATTTCGTTGC CCATTTTTCA GGGCGGCGCG
CTGGTGTCCA ATTTGCGCCT GTCGAAAGCG CAGGAAGCCG AAGCAGCGCT CGACTACCGG
AAGACGGTAT TGATGGCGCT GCGCGACGTG GATAACGCGC TCACGGTGTA CCGCACCGAT
CAGGCGCGGC GCGACTCGCT CGGCGAGAGC GTCGCTGCGG AACAGGCGGC GTTCGATCTC
GCACGCGACA GTTACCGCAA GGGGATTACG AGCTTCATCA ATGTGCTGGA TGCAGAGCGG
CAATTGGCGC AGGCCCGCCA GCAATATGCG CAGGGAACCA TGCAGGTGAG CACCGACCTG
GTGTCTTTAT ACAAGGCGCT TGGCGGCGGC TGGCAGAGTG ACGCGGATGC ATCGGCAGCG
CCTCGCGCGC GTCAGGGAGG ATAA
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| Protein sequence | MRRPLVNSPW LTARFSPLST LSTLSVAMLL AACAVGPDFH APKADVPDQW RDPQRSAAIA
TGASAANVAS VPTLDTDPDP RWWRNFNDPT LDALIGRAAR GNLDLQEAVL RIVEARTQVQ
SAASQGLPNV RATGSYQREQ LGVKGFLESD GVYGKVDQLG APNSPVNAIA PGAGATLQNG
ANNLLNQLTA PVNLWQAGFD ASWELDLFGR VRRSVEAANA QTEAAVESRN DALLSLEAEV
AQTYMQLRGA QALHAITASL VDEQREIVTL TQSQAKVGLT SELDVKSATA QLAQTQAQLP
QYEQQIAQAL NGLAYLVGEA PGALEVELAA PAAVPPVPPV VPVGLPSTLA RRRPDIRRAE
ASLHSATANV GVAVAQFYPD VSLTGQVGTR ATNASDLSRW SHLFYSFGPS ISLPIFQGGA
LVSNLRLSKA QEAEAALDYR KTVLMALRDV DNALTVYRTD QARRDSLGES VAAEQAAFDL
ARDSYRKGIT SFINVLDAER QLAQARQQYA QGTMQVSTDL VSLYKALGGG WQSDADASAA
PRARQGG
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