| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1322 |
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| Symbol | |
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| ID | 4008189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1907484 |
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| End bp | 1909700 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637951370 |
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| Product | glycogen operon protein GlgX |
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| Protein accession | YP_553990 |
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| Protein GI | 91778782 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0099235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0986293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC AGGTCAATTA CTCGACGCGC ATCGCGGAAG GCACGCCTTT TCCGCTCGGC
GCGACATGGA ACGGAAGCGG CGTCAACTTC GCGCTATTCT CGGCGCACGC TACCAAGGTC
GAACTGTGTC TGTTCGATGA AACCGGTGAA AACGAAATCG AACGCATCGA ACTGCCGGAA
TACACCGACG AGGTGTGGCA CGTGTTCGTG CCGAATCTCA AACCGGGCGC GGTCTACGGG
TATCGCGTGC ACGGACCTTA CGAGCCGGAG AAAGGGCACC GCTTCAATCC GAACAAGCTT
CTGCTCGACC CGTATGCAAA AGCGCACATC GGCGAGCTCA AATGGGCGCC GGAGATTTTC
GGCTATACGC TGGATTCCGA AGAGGGCGAC CTGTCTTTCG ATGAACGCGA CAGCGCGCCC
TTCGTGCCGA AATGCAAGGT GGTCGATGCC AATTTCTCGT GGAGTCACCC CGAGCGCAAT
GCATTGCCGT GGGAACGCGT GATTTTTTAT GAAGCCCATG TGCGCGGATT TACCAAACGG
CATCCGGAAG TACCGGAAAA TCTGCGCGGC ACCTTCGCCG GACTGGGGCA GCAGGTCGTG
CTCGACTACA TCAAGAACCT TGGCGTGACC TCGGTGGAAT TGATGCCGAT CCAGACCTTC
GTCAACGACA GTTATCTGCT CGATAAAGGA CTCACGAACT ACTGGGGCTA CAACACCATC
GGTTTTTTCG CGGCCGATCC GCGTTTCTTC GCGTCGTCGA TCGATTCGGT GGGCGAGTTC
AAGGAGATGG TGGACCGCTT TCACAACGCC AATCTCGAAG TCATTCTCGA CGTGGTCTAC
AACCATACGG CCGAAGGCAA CGAGCGCGGG CCGACCATCT CGTTCAAAGG TATCGACAAC
GCGTCGTACT ACCGGCTGAT GCCTGACGAG CCGCGCTACT ACATCAACGA CACCGGCACC
GGCAACACGC TGAACCTGTC GCATCCGCGC GTATTGCAGA TGGTGACCGA CAGCCTGCGC
TACTGGGTGA CGGAAATGAA AGTGGACGGT TTCCGTTTCG ACCTCGCCAC GATTCTCGGC
CGCGAACTGC ACGGTTTCGA CGAAGGAGGC GGTTTTCTCG ACAGTTGCCG GCAGGACCCC
GTGCTGTCCA GCGTGCGGCT GGTGGCCGAG CCGTGGGATT GCGGTCCCGG CGGTTATCAG
GTGGGCGGCT TTCCGCCCGG CTGGGCGGAG TGGAACGACC GCTTTCGCGA TACCGTGCGC
GAATACTGGA AGGGCGACGA AGGCAAGGTC CCGGATCTCG CCACGCGTCT CACCGGTTCG
GGCGACAAGT TCAACCATCG CGGCCGCCGC CCGTGGGCCA GCGTGAACTT CATCGCCGCG
CACGACGGCT TCACGCTCAA CGATCTGGTT TCGTACAACG ACAAACACAA CGAAGCCAAC
GGCGAGGACA ACAAGGACGG CCATTCCGAC AACAAATCCT GGAACATGGG CGTGGAAGGC
CCGACCGACG ATCCGGACAT TCGTCAGCAA CGCGAGCGAC AGAAGCGCAA TCTGCTCGCC
ACGCTGCTGT TGTCGCAAGG CACGCCGATG ATTCTCGCGG GCGACGAATT CGGCCGCACG
CAGAAGGGCA ACAACAACGC CTATTGTCAG GACAACGAGA TCAGCTGGGT CGATTGGGAA
GCGATCGACG ACGACGGCCG CGCGCTGATC GAGTTCGTCA GGAATCTGAC CACGCTGCGC
CACCGTCTGC CGGTGCTGCG GCGCGGCCGC TTTCTGACCG GCGAATACAA CGAGGCGCTG
GACGTGACCG ACGCGCGCTG GATCTCGCCG GACGGCAAGG ATCTCTCGCA GGAGCAATGG
GACGATGCGT CCATGCGCTG CTTTGGTCTC GTGATCGACG GCCGCGCGCA GGCGAGCGGC
ATTCGCCGTC CGGCTTCGGA CGCGACTTTG CTGCTGGTGC TGAATGCGCA TCACGACGTC
GTCAATTTCA CGCTGCCCGA CATTCCCGAA GGCCAGCGCT GGACCTGCCT GCTCGACACC
AACATGCCGG TGCGCTCCGA GTTGCCTCAC TTCGCGGCCG GCGACGCGTA TCAGGTGACC
GCCCGCTCGC TGCTGCTGCT TGCGCTGGAA GCGCCGAGCC GCGCCACGCA GCGCGTGTTC
GACCGCCTCG AAGAACAGCT GACCACCGAG GATAGCGAAC CGCCCGCGCA AGCTTGA
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| Protein sequence | MSSQVNYSTR IAEGTPFPLG ATWNGSGVNF ALFSAHATKV ELCLFDETGE NEIERIELPE
YTDEVWHVFV PNLKPGAVYG YRVHGPYEPE KGHRFNPNKL LLDPYAKAHI GELKWAPEIF
GYTLDSEEGD LSFDERDSAP FVPKCKVVDA NFSWSHPERN ALPWERVIFY EAHVRGFTKR
HPEVPENLRG TFAGLGQQVV LDYIKNLGVT SVELMPIQTF VNDSYLLDKG LTNYWGYNTI
GFFAADPRFF ASSIDSVGEF KEMVDRFHNA NLEVILDVVY NHTAEGNERG PTISFKGIDN
ASYYRLMPDE PRYYINDTGT GNTLNLSHPR VLQMVTDSLR YWVTEMKVDG FRFDLATILG
RELHGFDEGG GFLDSCRQDP VLSSVRLVAE PWDCGPGGYQ VGGFPPGWAE WNDRFRDTVR
EYWKGDEGKV PDLATRLTGS GDKFNHRGRR PWASVNFIAA HDGFTLNDLV SYNDKHNEAN
GEDNKDGHSD NKSWNMGVEG PTDDPDIRQQ RERQKRNLLA TLLLSQGTPM ILAGDEFGRT
QKGNNNAYCQ DNEISWVDWE AIDDDGRALI EFVRNLTTLR HRLPVLRRGR FLTGEYNEAL
DVTDARWISP DGKDLSQEQW DDASMRCFGL VIDGRAQASG IRRPASDATL LLVLNAHHDV
VNFTLPDIPE GQRWTCLLDT NMPVRSELPH FAAGDAYQVT ARSLLLLALE APSRATQRVF
DRLEEQLTTE DSEPPAQA
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