Gene Bxe_B1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1317 
Symbol 
ID4008194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1914375 
End bp1915241 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content63% 
IMG OID637951375 
ProductShort-chain dehydrogenase 
Protein accessionYP_553995 
Protein GI91778787 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.169913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0434292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CGCAGCGTCC CACACCGCCG TTTCCGAAGC AGCAGCAAAA TCACACGCCT 
GGGCACACGG CAGAAATGCA ACCTCAACCC GATCACGGCG AGCGCTCCTA TCGAGGCTCG
GGACGGCTCG CGGGCAAAGC GGCGATCGTC ACGGGCGGAG ATAGCGGAAT TGGCCGCGCC
GTTGCCATTG CGTTCGCTCG CGAAGGCGCG GACGTGCTGA TTTCGTATCT TGACGAGGAC
GACGACGCGC GCGAGACCGC GCGCTGGATC GAGGAGGCCG GCCGCAAGGC TGTCCTGCTG
CCTGGCGATA TCACGAACCC CGCGCACTGC AAGGCGATCG TCGAAAGAGC TATCGAGGCG
TTCGGCCGGC TCGACGTGCT GGTCAACAAT GCCGCCTATC AGATGAGCTA TCCCTCGCTC
GACGCGATCA GCGACCAGGA GTGGGACAAG ACTTTCGATA CGAACATTGG CGCGATGTTC
AGGATCACCC GGGCCGCGGT CAAGCATATG AAACCAGGCG CCGCGATCGT GAACACGACG
TCGATCAATG CGGATCATCC GAATCCCGGT CTGATTGCCT ACGCGGCGAC CAAGGGTGCG
ATTCAGAACT TCACCGGTGG CCTTGCGCAG TTGCTCGCGG AGAAAGGTAT CCGTGCGAAC
TGCGTGGCGC CGGGGCCGAT CTGGACGCCG CTGATTCCGT CCACCATGCC GCCGGAGAAA
GTCGAGCAAT TCGGCGCCCA GGTGCCGATG AAGCGCCCCG GCCAGCCCGC CGAACTGGCG
GCTGCCTACG TGATGCTGGC ATCCGACGAA GCCAGCTATA TTTCCGGCGC GACCATAGCG
GTCACGGGCG GCTCGCCGAT CATTTAG
 
Protein sequence
MSDTQRPTPP FPKQQQNHTP GHTAEMQPQP DHGERSYRGS GRLAGKAAIV TGGDSGIGRA 
VAIAFAREGA DVLISYLDED DDARETARWI EEAGRKAVLL PGDITNPAHC KAIVERAIEA
FGRLDVLVNN AAYQMSYPSL DAISDQEWDK TFDTNIGAMF RITRAAVKHM KPGAAIVNTT
SINADHPNPG LIAYAATKGA IQNFTGGLAQ LLAEKGIRAN CVAPGPIWTP LIPSTMPPEK
VEQFGAQVPM KRPGQPAELA AAYVMLASDE ASYISGATIA VTGGSPII