Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1317 |
Symbol | |
ID | 4008194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1914375 |
End bp | 1915241 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637951375 |
Product | Short-chain dehydrogenase |
Protein accession | YP_553995 |
Protein GI | 91778787 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.169913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0434292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CGCAGCGTCC CACACCGCCG TTTCCGAAGC AGCAGCAAAA TCACACGCCT GGGCACACGG CAGAAATGCA ACCTCAACCC GATCACGGCG AGCGCTCCTA TCGAGGCTCG GGACGGCTCG CGGGCAAAGC GGCGATCGTC ACGGGCGGAG ATAGCGGAAT TGGCCGCGCC GTTGCCATTG CGTTCGCTCG CGAAGGCGCG GACGTGCTGA TTTCGTATCT TGACGAGGAC GACGACGCGC GCGAGACCGC GCGCTGGATC GAGGAGGCCG GCCGCAAGGC TGTCCTGCTG CCTGGCGATA TCACGAACCC CGCGCACTGC AAGGCGATCG TCGAAAGAGC TATCGAGGCG TTCGGCCGGC TCGACGTGCT GGTCAACAAT GCCGCCTATC AGATGAGCTA TCCCTCGCTC GACGCGATCA GCGACCAGGA GTGGGACAAG ACTTTCGATA CGAACATTGG CGCGATGTTC AGGATCACCC GGGCCGCGGT CAAGCATATG AAACCAGGCG CCGCGATCGT GAACACGACG TCGATCAATG CGGATCATCC GAATCCCGGT CTGATTGCCT ACGCGGCGAC CAAGGGTGCG ATTCAGAACT TCACCGGTGG CCTTGCGCAG TTGCTCGCGG AGAAAGGTAT CCGTGCGAAC TGCGTGGCGC CGGGGCCGAT CTGGACGCCG CTGATTCCGT CCACCATGCC GCCGGAGAAA GTCGAGCAAT TCGGCGCCCA GGTGCCGATG AAGCGCCCCG GCCAGCCCGC CGAACTGGCG GCTGCCTACG TGATGCTGGC ATCCGACGAA GCCAGCTATA TTTCCGGCGC GACCATAGCG GTCACGGGCG GCTCGCCGAT CATTTAG
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Protein sequence | MSDTQRPTPP FPKQQQNHTP GHTAEMQPQP DHGERSYRGS GRLAGKAAIV TGGDSGIGRA VAIAFAREGA DVLISYLDED DDARETARWI EEAGRKAVLL PGDITNPAHC KAIVERAIEA FGRLDVLVNN AAYQMSYPSL DAISDQEWDK TFDTNIGAMF RITRAAVKHM KPGAAIVNTT SINADHPNPG LIAYAATKGA IQNFTGGLAQ LLAEKGIRAN CVAPGPIWTP LIPSTMPPEK VEQFGAQVPM KRPGQPAELA AAYVMLASDE ASYISGATIA VTGGSPII
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