Gene Bxe_B1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1315 
Symbol 
ID4008196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1916254 
End bp1917930 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content65% 
IMG OID637951377 
ProductATP-dependent DNA ligase 
Protein accessionYP_553997 
Protein GI91778789 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0693977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.128717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TCGCCGCCCT CTACACCGCG CTCGACGCCA CCACGTCCAC GCACGACAAA 
CTCGAAGCGC TCACCAGCTA TTTCGCGGTG GCCGAGCCGG AAGACGCCGC CTGGGCGTCG
TATTTTCTTG CCGGCGGCAA GCCGCGCCAA TCGGTGCCCA CGCGCCTTTT AAGCGAGATC
GCCCGCGAGC GCGCCGGTCT GCCGGCGTGG CTGTTCGAGG AGTCGTATCA CGCGGTGGGC
GATCTGGCCG AGACCATCGC GCATATCCTG CCGCCCGCGC AGCGCAACTC CGAACTGGGT
CTCACGCAGT GGATCGAGCA CCGCGTATTG ACGTTGCGCG GTGCGGCGCC GGAAGAGTTG
CGCACGCGTC TCATCAGCTA TTGGGACGAA CTCGATTGGG GTGGCCGTTT TCTGCTGACG
AAACTGATTG GCGGCGGGTT CCGCGTGGGC GTAGCACGGC AACTGGTGGT GCGGGCGCTG
GCGGAAGTGG CAGGCGTCGA TCATAAGCGG ATCGCGCAAC GCATGGTCGG CTGGACCGAC
TCGCAACAGA AGCCCGACGC GGCGCGCTAC CTGCGTTTGA TCGCACCTGA GGCGACCAGC
GACGATGCGC AGTCCGGTGC GCCCCAGCAT GACAGCGATC TCGGACTGCC GTATCCGTTC
TTTCTCGCGC ATCCGTTGCA AGCCGATCCG GCGACGCTCG GCGATCCGTC GCAATGGCAG
ATCGAATGGA AATGGGACGG CATTCGCGCA CAGCTCGTCA AGCGTGGCGG ACGGGTGTGG
CTGTGGTCGC GCGGCGAGGA CCTGATCACG GACCGGTTTC CCGAAGTCGC GGCGCTAGGG
GAAGCCTTGC CGGAAGGCTT CGTGATCGAC GGCGAGATTC TCGCGTGGGA ACCCGGCGCG
AGCGCGCCAT TGCCGTTCGC ACGTTTGCAG CCGCGTATCG CGCGCAAAAC GTTGACGAAA
AAAATCCTCG CCGATTCGCC CGCCACGCTG CTTGCCTACG ATCTGCTCGA AGCGCACGGC
AAGGATCTGC GCATGACGCC GCTCGCCGAA CGGCGCGCGC AACTGGATGC ATTGGCAACT
ACCGTGGACA GCACGCTCGC ACGCGATCTG CTGCGCGTAT CGCCGCTGGT GAGTGCGCCC
GATTGGCAAG CCCTCGCGGC GCTGCGCGAC GAGAGCCGGG CGCGCGGCGT GGAAGGCCTG
ATGGTCAAGG AGCGCGAGTC GATGTACGGC GTGGGCCGCA CCAAGGCCTC CGGCACGTGG
TGGAAATGGA AGATCGATCC GTATGCGGTG GATGCGGTGC TGGTTTACGC GCAACGCGGC
CACGGCCGCC GTGCGAGTCT CTACACCGAT TTCACATTTG CCGTGTGGGA CGAAGCAGAC
GGCGTGCGCA CGCTGGTGCC GTTCGCCAAG GCTTATTCCG GTCTCACTGA CGAAGAAATG
CGCCAGGTGG ATGCAATCGT GCGCAAGACC ACGATCGAAA AGTTCGGCCC CGTGCGCAGC
GTAACGCCCA CGCTGGTATT CGAAATCGGT TTCGAAGGCA TTCAGGCGAG CCCGCGTCAT
AAGTCCGGCG TGGCGGTGCG GTTTCCGCGC ATGCTGCGTT GGCGCACCGA CAAACATATC
GACGACGCCG ACACACTGCC AATGCTCAAA GGCTTCATCG ACGACCGTGC GGGATAA
 
Protein sequence
MKRFAALYTA LDATTSTHDK LEALTSYFAV AEPEDAAWAS YFLAGGKPRQ SVPTRLLSEI 
ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRNSELG LTQWIEHRVL TLRGAAPEEL
RTRLISYWDE LDWGGRFLLT KLIGGGFRVG VARQLVVRAL AEVAGVDHKR IAQRMVGWTD
SQQKPDAARY LRLIAPEATS DDAQSGAPQH DSDLGLPYPF FLAHPLQADP ATLGDPSQWQ
IEWKWDGIRA QLVKRGGRVW LWSRGEDLIT DRFPEVAALG EALPEGFVID GEILAWEPGA
SAPLPFARLQ PRIARKTLTK KILADSPATL LAYDLLEAHG KDLRMTPLAE RRAQLDALAT
TVDSTLARDL LRVSPLVSAP DWQALAALRD ESRARGVEGL MVKERESMYG VGRTKASGTW
WKWKIDPYAV DAVLVYAQRG HGRRASLYTD FTFAVWDEAD GVRTLVPFAK AYSGLTDEEM
RQVDAIVRKT TIEKFGPVRS VTPTLVFEIG FEGIQASPRH KSGVAVRFPR MLRWRTDKHI
DDADTLPMLK GFIDDRAG