Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1315 |
Symbol | |
ID | 4008196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1916254 |
End bp | 1917930 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951377 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_553997 |
Protein GI | 91778789 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0693977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.128717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT TCGCCGCCCT CTACACCGCG CTCGACGCCA CCACGTCCAC GCACGACAAA CTCGAAGCGC TCACCAGCTA TTTCGCGGTG GCCGAGCCGG AAGACGCCGC CTGGGCGTCG TATTTTCTTG CCGGCGGCAA GCCGCGCCAA TCGGTGCCCA CGCGCCTTTT AAGCGAGATC GCCCGCGAGC GCGCCGGTCT GCCGGCGTGG CTGTTCGAGG AGTCGTATCA CGCGGTGGGC GATCTGGCCG AGACCATCGC GCATATCCTG CCGCCCGCGC AGCGCAACTC CGAACTGGGT CTCACGCAGT GGATCGAGCA CCGCGTATTG ACGTTGCGCG GTGCGGCGCC GGAAGAGTTG CGCACGCGTC TCATCAGCTA TTGGGACGAA CTCGATTGGG GTGGCCGTTT TCTGCTGACG AAACTGATTG GCGGCGGGTT CCGCGTGGGC GTAGCACGGC AACTGGTGGT GCGGGCGCTG GCGGAAGTGG CAGGCGTCGA TCATAAGCGG ATCGCGCAAC GCATGGTCGG CTGGACCGAC TCGCAACAGA AGCCCGACGC GGCGCGCTAC CTGCGTTTGA TCGCACCTGA GGCGACCAGC GACGATGCGC AGTCCGGTGC GCCCCAGCAT GACAGCGATC TCGGACTGCC GTATCCGTTC TTTCTCGCGC ATCCGTTGCA AGCCGATCCG GCGACGCTCG GCGATCCGTC GCAATGGCAG ATCGAATGGA AATGGGACGG CATTCGCGCA CAGCTCGTCA AGCGTGGCGG ACGGGTGTGG CTGTGGTCGC GCGGCGAGGA CCTGATCACG GACCGGTTTC CCGAAGTCGC GGCGCTAGGG GAAGCCTTGC CGGAAGGCTT CGTGATCGAC GGCGAGATTC TCGCGTGGGA ACCCGGCGCG AGCGCGCCAT TGCCGTTCGC ACGTTTGCAG CCGCGTATCG CGCGCAAAAC GTTGACGAAA AAAATCCTCG CCGATTCGCC CGCCACGCTG CTTGCCTACG ATCTGCTCGA AGCGCACGGC AAGGATCTGC GCATGACGCC GCTCGCCGAA CGGCGCGCGC AACTGGATGC ATTGGCAACT ACCGTGGACA GCACGCTCGC ACGCGATCTG CTGCGCGTAT CGCCGCTGGT GAGTGCGCCC GATTGGCAAG CCCTCGCGGC GCTGCGCGAC GAGAGCCGGG CGCGCGGCGT GGAAGGCCTG ATGGTCAAGG AGCGCGAGTC GATGTACGGC GTGGGCCGCA CCAAGGCCTC CGGCACGTGG TGGAAATGGA AGATCGATCC GTATGCGGTG GATGCGGTGC TGGTTTACGC GCAACGCGGC CACGGCCGCC GTGCGAGTCT CTACACCGAT TTCACATTTG CCGTGTGGGA CGAAGCAGAC GGCGTGCGCA CGCTGGTGCC GTTCGCCAAG GCTTATTCCG GTCTCACTGA CGAAGAAATG CGCCAGGTGG ATGCAATCGT GCGCAAGACC ACGATCGAAA AGTTCGGCCC CGTGCGCAGC GTAACGCCCA CGCTGGTATT CGAAATCGGT TTCGAAGGCA TTCAGGCGAG CCCGCGTCAT AAGTCCGGCG TGGCGGTGCG GTTTCCGCGC ATGCTGCGTT GGCGCACCGA CAAACATATC GACGACGCCG ACACACTGCC AATGCTCAAA GGCTTCATCG ACGACCGTGC GGGATAA
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Protein sequence | MKRFAALYTA LDATTSTHDK LEALTSYFAV AEPEDAAWAS YFLAGGKPRQ SVPTRLLSEI ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRNSELG LTQWIEHRVL TLRGAAPEEL RTRLISYWDE LDWGGRFLLT KLIGGGFRVG VARQLVVRAL AEVAGVDHKR IAQRMVGWTD SQQKPDAARY LRLIAPEATS DDAQSGAPQH DSDLGLPYPF FLAHPLQADP ATLGDPSQWQ IEWKWDGIRA QLVKRGGRVW LWSRGEDLIT DRFPEVAALG EALPEGFVID GEILAWEPGA SAPLPFARLQ PRIARKTLTK KILADSPATL LAYDLLEAHG KDLRMTPLAE RRAQLDALAT TVDSTLARDL LRVSPLVSAP DWQALAALRD ESRARGVEGL MVKERESMYG VGRTKASGTW WKWKIDPYAV DAVLVYAQRG HGRRASLYTD FTFAVWDEAD GVRTLVPFAK AYSGLTDEEM RQVDAIVRKT TIEKFGPVRS VTPTLVFEIG FEGIQASPRH KSGVAVRFPR MLRWRTDKHI DDADTLPMLK GFIDDRAG
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