| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1300 |
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| Symbol | |
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| ID | 4008211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1935202 |
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| End bp | 1936956 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637951390 |
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| Product | putative cobalamin biosynthesis protein cobT |
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| Protein accession | YP_554010 |
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| Protein GI | 91778802 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00926856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.404271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCA CGCGCGATAT GCGTGACACG CGCGGCTTCG CGTTCGAATC CACGCTCAGC
AAGGTCGCCC GCGTGCTGAC CGGGCAATAC GGCGTGACGG TCGCGTTCAG TCCGGACGGT
CCGCGCGTCG AGCCCGGGCG CATTGTGATT CCCGACTACG AGTTGAATGG CGGGGTCGAG
CGCGATGTGC TGATCGGCTA TCTGGATCTG CTGGTCGCGC GCGCCAGGCA TGCTTCGCTC
GCGCAACTCG ACGCGCTGCC CTCGGGCGTC GCCGCGAATC TCGCGCAGGT GATCGAAGAC
CGCCGCGTGT GCGGGCAATT GCTCGACGAA TATCCGGGCG CGCGCTGGTT CATCGGCAGG
TTGCGCCTGC ATGCCGCCGA GCGCGTGCGG CAGCGCTGGC CGAAGCTGCA TTGGCGCGAC
AGGCTGGTCT GGCTGGTGGA GCGCGCGTTG TGGGACGAAA CGCCCACCAG CACCGAAGCA
AGCCATTCGC TGCTCGCCGC CTTGCATGCC GCGCAGGACC TGCTGCACGA CGCCCGCGCG
AGCCGTTCGA CCGCGCAGAG CATCGCGTCG GCGCAGGCGC TCGTGGCGCG CGTACGCGCG
CTGTCGGCGG GCGAAGTGAA CAGCATGGCG TTCACCGCGG ATGCGCTCGA CGACATCGAT
ACCGAAACGG CCGCGTCATC GTCCGCGCCG CTCGATGACG GCGACACCGT GCTGCCCGAT
CAGGCCAGCG CGAACTCGCC GCCGTCCGAT CGAAGCGGCG GCGCGCAGGC AGACAACGCG
GTCGGCATGG GTCGATCGCC GGCGGACGCG CAACAGCCGT CAGAGCGTTC CGAAGGCAAC
GCAGCCGGCT TCCCAGCGGA TGCATGGCGA GCCCGGCTGT CGATTCCGCT CGCCACCGAG
TTCGACGACA TCCGCGATCT CACGGGCCAG GGCGACAGCG CCGCGTGGCG CGAACTGCGG
GCGCAGGCTC GCGCGGACAC CGCGCCGCTC AAGGAAAAGC TCGAACGCGC GCTGAGCGCG
GACGAGCGCA CCCGCTGGCG CCGCGAGCAG GAGCGCGGCG AGATCGATCG CACCGCGCTG
GCCAAACTCG CGACTTCGCC CGGCTATCGC ACGCCGTTTC GCACGCAGCG GGCCGCCAAA
GGACGCGACG TGGCCGTGAC CCTGCTGATC GACCGCAGCG GCTCGATGGC CGGCCGCAAG
ATCGAACTCG CGCGCCAGTG CGCGGCCGCC CTGTGCGATG CGCTCACGCA GTTGTCGTTC
GATTGCGAAG TGCTCGGCTA TTGTTCGGTC GAATCCCCGC CCATGCAGCA GCTCTACGCA
CGGCAACTCG CCGCCGGTGC GGATTTGCGG CGCTATAACC GCTTCGTCGA ACGACTCGAT
CTGAAGGTCT ACAAACGCTT TGGCGCGACC GATCTGAGCG GGATCGCCGC AATCGACTGC
GGACACGAGA ATCCGGACGG CGAGGCGCTG GCCTGGGCCG CGACGCGGCT CGCCGATCAC
CCGGCCGAAC GCCGCATTCT GATGATGTTT TCCGACGGCT ACCCGTCCAC CGGCGACGGC
GATCCGCAGG TGCTGCGCAG CGATCTGCGC GAGCGCATTG CGGCGATCGG CAAGCGCGGT
ATCGAACTGG TGGGAATCGG CGTGCTGACC GACGCGGTGG AGGACTTCTA TCCGCACAAC
GTGGTAGTGA GCCGCCTCGC CGAACTGCCG GCGACGGTGT TCTCCGTATT GAGCGCAATG
TTGCTCGCAC GCTGA
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| Protein sequence | MHATRDMRDT RGFAFESTLS KVARVLTGQY GVTVAFSPDG PRVEPGRIVI PDYELNGGVE
RDVLIGYLDL LVARARHASL AQLDALPSGV AANLAQVIED RRVCGQLLDE YPGARWFIGR
LRLHAAERVR QRWPKLHWRD RLVWLVERAL WDETPTSTEA SHSLLAALHA AQDLLHDARA
SRSTAQSIAS AQALVARVRA LSAGEVNSMA FTADALDDID TETAASSSAP LDDGDTVLPD
QASANSPPSD RSGGAQADNA VGMGRSPADA QQPSERSEGN AAGFPADAWR ARLSIPLATE
FDDIRDLTGQ GDSAAWRELR AQARADTAPL KEKLERALSA DERTRWRREQ ERGEIDRTAL
AKLATSPGYR TPFRTQRAAK GRDVAVTLLI DRSGSMAGRK IELARQCAAA LCDALTQLSF
DCEVLGYCSV ESPPMQQLYA RQLAAGADLR RYNRFVERLD LKVYKRFGAT DLSGIAAIDC
GHENPDGEAL AWAATRLADH PAERRILMMF SDGYPSTGDG DPQVLRSDLR ERIAAIGKRG
IELVGIGVLT DAVEDFYPHN VVVSRLAELP ATVFSVLSAM LLAR
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