Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1280 |
Symbol | |
ID | 4008231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1953214 |
End bp | 1955103 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951409 |
Product | hypothetical protein |
Protein accession | YP_554029 |
Protein GI | 91778821 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCCTC GACTGCTGGA GTACTACACG AGTGAGCTGG TCTACATGCG TGAACTGGCG GGTGAGTTCG CGCAGGCCCA TCCCAAGATT GCCCGGCGCC TGGGCATGCA GGCGGGCGAG ATTGGCGACC CGTACGTCGA GCGTCTGATC GAATCGTTCT GTTTCCTGTC CGCACGCATG CAGTTGCGGC TCGACGCCGA ATTTCCCCGC CTGACGGAAC GGCTGCTCGA AATCATCTAT CCGAACTATG CGGCGCCCAC GCCGTCAATC GCGGTTGCGC GGCTGTTTCC CTGCGCCACG GAGGGCAATC TCGCCGAAGG CGCGCACATC GCGCGCGGTG CGGCGTTCAT GAGCGGCACG CTCGTCAACG AGAGTACGCG CTGCCAGTTC CGCAGCAGCC AGGACGTCAC GCTATACCCG CTGGAGATCA GCAGCGCGAA GCTGACCGGC ATCCCGCCCG ACATTCCCGC GCTCGACCGC TACGTGCGCT ACGGCGCCGA GGTCCGGGGC GCGTTGCGGC TGCGCCTGCG CACCACGAAC GGTGTCGCCA TCGAGAGCCT CCGGGGACTG CACCGGCTGC CGGTGTATCT GGCCGGCGAC GAGCGGACGG CTTCCCACCT GTTCGAATTG CTGCACGCGG CCGGTATCGC GTCGATCATC GGCGAGCCGG GACGGTTCGG CACGCCGGGC GCTCCGTTTC ATGCGGTGAG TGAGGAGGCG GTGGTTCATG AGGGGTTGGA ACCTGGACAG GGGCTGCTCC CGCTCGTTTC GCAGAAGCTT CACGGGCACA ATCTGCTGCA CGAGTTCGCG GCATGCCCGT CGCGCTTCTA CTTTTTCACG CTGACCGGGC TCGCGGCCGG CCTGCGCCAG GTGTGCAGCC GGGAAGCGGA GATCGTCGTA CTGCTCGACC GGCCGCCCGG CGCGCTGGCC GACCGGGTGG ATGCGTCGCA GTTCGCGCTG TTCTGTACGC CGGTCATCAA TCTGTTCAAA AGCCGGTCCG ATCCGGCGGA AGCGTATGGC ACGGGCGCCG AGTTCCAACT CGTTCCCGAC CCGCTTGCGC CGCGCGATTA CGAGGTGTTT TCAGTCCAGG GTTTGTATGG TCAGGTCAGC AAGAATTCGG AGTCACTCGA ATTCCGTCCG CTGTACCAGA CGCTGACCAA CGACGAAGGC AATCACGGGC GGTTTTTCAC GCTGCGTCGT GAGCGCAAGC TGGCGTCGGA CTCGCTGCGC CGCTACGGCA CGCGCACGCC GTACATCGGC ACGGAGGCTT TCGTGTCATT GGTCGATCAG GACGAACGGC CCTATGAACA GCACATGCGC TACCTCTCGA TCGACGCATG GCTGACCAAC CGCGACCTGC CCAACCTGAT CCCGTGCAAT GGCGTCAGCG ATCTCACGCT GCTGCAATCA TCACCGGTTC AACAGGTGGG GTTGATCCGC ACGCCCAGTG TTCCGCGCGC ACCCTATGCG GAGCGCGAGG CGGCATGGCG GCTGATCCGC CAGTTGAACT TCAACTACCT CACGCTGCAG GCGCGAGCTG GCGAGGCGTC GGGCGCGAGC CTGCGTGATC TGCTGCAACT GTTCGTTGCC GCGGACAACA CGGCTTACCG TCAGCAGATC GGGAGTCTGG TGAAAGTCGG CAGCCGGACG GTGACACGCA AGCTTCCGCG TTCCGGCGAT CTTGCCCTCG GACGTGGTAT CGCGTGCACG CTGACCGTTG ACGAGTCGGG TCTCGGCGGC GTCAGCACCT ATCTGCTCGG CCTGATTCTC GAACACTACC TGGCGCGGCA TGTATCGGCT CATTCGTTTA CACAGACCGA GCTGCATTCG GTGCAGCGCG GCCGCGTGGT GGTGTGGCCG GTGCGCATGG GCACACGTGG CGTGGCCTGA
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Protein sequence | MDPRLLEYYT SELVYMRELA GEFAQAHPKI ARRLGMQAGE IGDPYVERLI ESFCFLSARM QLRLDAEFPR LTERLLEIIY PNYAAPTPSI AVARLFPCAT EGNLAEGAHI ARGAAFMSGT LVNESTRCQF RSSQDVTLYP LEISSAKLTG IPPDIPALDR YVRYGAEVRG ALRLRLRTTN GVAIESLRGL HRLPVYLAGD ERTASHLFEL LHAAGIASII GEPGRFGTPG APFHAVSEEA VVHEGLEPGQ GLLPLVSQKL HGHNLLHEFA ACPSRFYFFT LTGLAAGLRQ VCSREAEIVV LLDRPPGALA DRVDASQFAL FCTPVINLFK SRSDPAEAYG TGAEFQLVPD PLAPRDYEVF SVQGLYGQVS KNSESLEFRP LYQTLTNDEG NHGRFFTLRR ERKLASDSLR RYGTRTPYIG TEAFVSLVDQ DERPYEQHMR YLSIDAWLTN RDLPNLIPCN GVSDLTLLQS SPVQQVGLIR TPSVPRAPYA EREAAWRLIR QLNFNYLTLQ ARAGEASGAS LRDLLQLFVA ADNTAYRQQI GSLVKVGSRT VTRKLPRSGD LALGRGIACT LTVDESGLGG VSTYLLGLIL EHYLARHVSA HSFTQTELHS VQRGRVVVWP VRMGTRGVA
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