Gene Bxe_B1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1280 
Symbol 
ID4008231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1953214 
End bp1955103 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content65% 
IMG OID637951409 
Producthypothetical protein 
Protein accessionYP_554029 
Protein GI91778821 
COG category[S] Function unknown 
COG ID[COG3519] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03359] type VI secretion protein, VC_A0110 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCTC GACTGCTGGA GTACTACACG AGTGAGCTGG TCTACATGCG TGAACTGGCG 
GGTGAGTTCG CGCAGGCCCA TCCCAAGATT GCCCGGCGCC TGGGCATGCA GGCGGGCGAG
ATTGGCGACC CGTACGTCGA GCGTCTGATC GAATCGTTCT GTTTCCTGTC CGCACGCATG
CAGTTGCGGC TCGACGCCGA ATTTCCCCGC CTGACGGAAC GGCTGCTCGA AATCATCTAT
CCGAACTATG CGGCGCCCAC GCCGTCAATC GCGGTTGCGC GGCTGTTTCC CTGCGCCACG
GAGGGCAATC TCGCCGAAGG CGCGCACATC GCGCGCGGTG CGGCGTTCAT GAGCGGCACG
CTCGTCAACG AGAGTACGCG CTGCCAGTTC CGCAGCAGCC AGGACGTCAC GCTATACCCG
CTGGAGATCA GCAGCGCGAA GCTGACCGGC ATCCCGCCCG ACATTCCCGC GCTCGACCGC
TACGTGCGCT ACGGCGCCGA GGTCCGGGGC GCGTTGCGGC TGCGCCTGCG CACCACGAAC
GGTGTCGCCA TCGAGAGCCT CCGGGGACTG CACCGGCTGC CGGTGTATCT GGCCGGCGAC
GAGCGGACGG CTTCCCACCT GTTCGAATTG CTGCACGCGG CCGGTATCGC GTCGATCATC
GGCGAGCCGG GACGGTTCGG CACGCCGGGC GCTCCGTTTC ATGCGGTGAG TGAGGAGGCG
GTGGTTCATG AGGGGTTGGA ACCTGGACAG GGGCTGCTCC CGCTCGTTTC GCAGAAGCTT
CACGGGCACA ATCTGCTGCA CGAGTTCGCG GCATGCCCGT CGCGCTTCTA CTTTTTCACG
CTGACCGGGC TCGCGGCCGG CCTGCGCCAG GTGTGCAGCC GGGAAGCGGA GATCGTCGTA
CTGCTCGACC GGCCGCCCGG CGCGCTGGCC GACCGGGTGG ATGCGTCGCA GTTCGCGCTG
TTCTGTACGC CGGTCATCAA TCTGTTCAAA AGCCGGTCCG ATCCGGCGGA AGCGTATGGC
ACGGGCGCCG AGTTCCAACT CGTTCCCGAC CCGCTTGCGC CGCGCGATTA CGAGGTGTTT
TCAGTCCAGG GTTTGTATGG TCAGGTCAGC AAGAATTCGG AGTCACTCGA ATTCCGTCCG
CTGTACCAGA CGCTGACCAA CGACGAAGGC AATCACGGGC GGTTTTTCAC GCTGCGTCGT
GAGCGCAAGC TGGCGTCGGA CTCGCTGCGC CGCTACGGCA CGCGCACGCC GTACATCGGC
ACGGAGGCTT TCGTGTCATT GGTCGATCAG GACGAACGGC CCTATGAACA GCACATGCGC
TACCTCTCGA TCGACGCATG GCTGACCAAC CGCGACCTGC CCAACCTGAT CCCGTGCAAT
GGCGTCAGCG ATCTCACGCT GCTGCAATCA TCACCGGTTC AACAGGTGGG GTTGATCCGC
ACGCCCAGTG TTCCGCGCGC ACCCTATGCG GAGCGCGAGG CGGCATGGCG GCTGATCCGC
CAGTTGAACT TCAACTACCT CACGCTGCAG GCGCGAGCTG GCGAGGCGTC GGGCGCGAGC
CTGCGTGATC TGCTGCAACT GTTCGTTGCC GCGGACAACA CGGCTTACCG TCAGCAGATC
GGGAGTCTGG TGAAAGTCGG CAGCCGGACG GTGACACGCA AGCTTCCGCG TTCCGGCGAT
CTTGCCCTCG GACGTGGTAT CGCGTGCACG CTGACCGTTG ACGAGTCGGG TCTCGGCGGC
GTCAGCACCT ATCTGCTCGG CCTGATTCTC GAACACTACC TGGCGCGGCA TGTATCGGCT
CATTCGTTTA CACAGACCGA GCTGCATTCG GTGCAGCGCG GCCGCGTGGT GGTGTGGCCG
GTGCGCATGG GCACACGTGG CGTGGCCTGA
 
Protein sequence
MDPRLLEYYT SELVYMRELA GEFAQAHPKI ARRLGMQAGE IGDPYVERLI ESFCFLSARM 
QLRLDAEFPR LTERLLEIIY PNYAAPTPSI AVARLFPCAT EGNLAEGAHI ARGAAFMSGT
LVNESTRCQF RSSQDVTLYP LEISSAKLTG IPPDIPALDR YVRYGAEVRG ALRLRLRTTN
GVAIESLRGL HRLPVYLAGD ERTASHLFEL LHAAGIASII GEPGRFGTPG APFHAVSEEA
VVHEGLEPGQ GLLPLVSQKL HGHNLLHEFA ACPSRFYFFT LTGLAAGLRQ VCSREAEIVV
LLDRPPGALA DRVDASQFAL FCTPVINLFK SRSDPAEAYG TGAEFQLVPD PLAPRDYEVF
SVQGLYGQVS KNSESLEFRP LYQTLTNDEG NHGRFFTLRR ERKLASDSLR RYGTRTPYIG
TEAFVSLVDQ DERPYEQHMR YLSIDAWLTN RDLPNLIPCN GVSDLTLLQS SPVQQVGLIR
TPSVPRAPYA EREAAWRLIR QLNFNYLTLQ ARAGEASGAS LRDLLQLFVA ADNTAYRQQI
GSLVKVGSRT VTRKLPRSGD LALGRGIACT LTVDESGLGG VSTYLLGLIL EHYLARHVSA
HSFTQTELHS VQRGRVVVWP VRMGTRGVA