| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1242 |
|---|
| Symbol | |
|---|
| ID | 4008269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1992372 |
|---|
| End bp | 1994186 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951444 |
|---|
| Product | precorrin-3 methyltransferase |
|---|
| Protein accession | YP_554064 |
|---|
| Protein GI | 91778856 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase
[COG2073] Cobalamin biosynthesis protein CbiG |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.38212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGA TGACCGCGCC CGCGATTGTG ATTCTCGGCG CAGGCGCGTT GGCGACGGCG
CGTCGCATTC AGGCGCTGTA TGCGGATAGC CAGGTGCATG GGTTGCAGGG ACGCGTCGAG
GCAGATGTGC CGTACCGCGA ACTCGGGGCG CATTTGCGGG AGCTGTATGC GCGCGGCACG
CCGATCGTGG CGTTGTGCGC GACGGGCATC GTGATTCGCT GTGTCGCGCC GTCGTTGTCG
AACAAGGGCG TCGAGCCGCC GGTGCTGGCC GTCGCCGAAG ACGGCAGCGC AGTCGTGCCG
CTGCTCGGCG GTCTTGCCGG CGTCAACGTG ATGGCGCGCG AGATTGCCGC AATGCTAGCC
GTGCCGGCCG CCATCACCAC GAGCGGCGAA TTGCGTTTCG GCACCTGCGT GCTCAATCCA
CCCGATGGTT ATACGCTCGC CGATATCGGG CAAGGCAAAC GCTTCGTGTC GGATTTGCTG
GCTGGTGAAA GCACACGTGT CGAAGGCGAA GCGCCGTGGC TCGACGGCGC GCAACTGCCG
CGCTCCGCGT CGGCGCGTCT GGCGATTCGC GTGACGCCGC GTGTGTGGGA CGGACGCGAG
GATGAGCTGG TGATTCATCC ACGCAGCGTG GTGGCAGCGG TGACGGGTGC GGGTGCGGGT
GCGGGTGCGG GTGCGGGTGC GGGTGCGGGT GCGGGTGCGG GTGCGGGTGC GGGTGCGGGT
GCGGGTGCGG GTGCCGGTGC CGGTGCCGGT GCCGGTGCGC AGATTGTGGC CCGCGTGCGT
GACGCACTGG ACGCGCATGG TCTCGCGCCG CTTTCGCTCG CGGCATTGCT CGCTTCCTCT
GAACACATGA CCGATCCGGC GCTTGCCGAA GCCGCCGCGA ATCTGAACGT GCCGCTACGC
TTCGCGCCGA CGCGTCCCGA AGATGGCGAA CCGCCGGCTA ATCTGCTGCA TGCCGCGCTA
CGCATTCCAT ACGAGACGCT GCATAACGAT GCGACGGCTG GCGTCGCGCT GGCATTGGCA
CCGCTCGCCG TCGATCCGGA CACGATCGGC CGTGCGCGCG GACGTCTGAC CGTGATCGGC
CTCGGCCCCG GCAGCGCCGA TCTGATGGTG CCTGCCGCGC GCACGGCGCT GAACCTCGCC
ACCGATATCC TCGGCTACGA CACCTACGTG AAAATGGCCG GCCCGTTGCG CGCCGACCAG
CGCGTGCACG GCACGGACAA TCGCGAGGAA CTGCAGCGCG CGCGGCACGC GTTCGAACTG
GCGAGCGAAG GACGCGCCGT GGTGATGGTG TCCTCAGGCG ATCCCGGCGT TTTCGCGATG
GCGTCGGCGG TGCTCGAAGT GTTAGAGGCA TCGCAGAACA CGGACTGGGC AGCGGTTGAA
CTGGAAATCT TGCCCGGCGT ATCGGCGGCG ATGGCGACGG CGGCGCGAGC GGGTGCGCCG
TTGGGTCATG ATTTTTGCAT GCTGTCGCTA TCCGACAATC TGAAGCCTTG GGCGATCATC
GAAAAGCGCC TTATGCATGC GGCCGAAGCG GACCTGGTGA TGGCGTTCTA TAACCCGATT
TCGCGCGCGC GGCCCTGGCA ACTGGATAAA GCGTTGGACA TTGTGCGGGA ATATCGGGGT
GCGCAGACGC AGGTGGTGCT GGGCCGGGAC ATTGGTCGAC CCGGCAGCAC GCTGCGGACG
ATCACGCTAG GCGAATTGCG CTCGTCCGAT GTGGATATGC GCACGATGGT GATCGTGGGG
TCGTCCACGA CGCGGCGGTT CGGCAATGGG GATGAAGGGG GTGAGTGGGT TTATACGCCG
CGGTGGTATG AGTGA
|
|---|
| Protein sequence | MARMTAPAIV ILGAGALATA RRIQALYADS QVHGLQGRVE ADVPYRELGA HLRELYARGT
PIVALCATGI VIRCVAPSLS NKGVEPPVLA VAEDGSAVVP LLGGLAGVNV MAREIAAMLA
VPAAITTSGE LRFGTCVLNP PDGYTLADIG QGKRFVSDLL AGESTRVEGE APWLDGAQLP
RSASARLAIR VTPRVWDGRE DELVIHPRSV VAAVTGAGAG AGAGAGAGAG AGAGAGAGAG
AGAGAGAGAG AGAQIVARVR DALDAHGLAP LSLAALLASS EHMTDPALAE AAANLNVPLR
FAPTRPEDGE PPANLLHAAL RIPYETLHND ATAGVALALA PLAVDPDTIG RARGRLTVIG
LGPGSADLMV PAARTALNLA TDILGYDTYV KMAGPLRADQ RVHGTDNREE LQRARHAFEL
ASEGRAVVMV SSGDPGVFAM ASAVLEVLEA SQNTDWAAVE LEILPGVSAA MATAARAGAP
LGHDFCMLSL SDNLKPWAII EKRLMHAAEA DLVMAFYNPI SRARPWQLDK ALDIVREYRG
AQTQVVLGRD IGRPGSTLRT ITLGELRSSD VDMRTMVIVG SSTTRRFGNG DEGGEWVYTP
RWYE
|
|---|
| |