Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1231 |
Symbol | |
ID | 4008280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2007351 |
End bp | 2008811 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637951455 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_554075 |
Protein GI | 91778867 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0812696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.324306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAG TCGGTTCGAG TTTTTTCTGG GTGTCGGCAG TTGGGCTTTG CCTGTGTCTG AGCGGCTGCC TGATGGGTCC AGACTATGTG AGACCGTCTG TCGAAACACC GGCCACGTTT CGCTTTTCAG ATAGTACCCA GGCGCAGATC GTCGATACGG CGTGGTGGGC GCAATTCGGC GACCCCGTGC TGAACGAACT CATTTCGACC GCGCTCGCGC AGAACAGGGA CCTGAAAATC GCCGCGGCCC GAGTCGACGA GTTTCGCGGA CAGTTCGTCA CCACGCGTTC GCAACTATTT CCGCAGATCA GTGCGGGTTT CAACGCCGGT CGCCAGCGTG TCTCGCCGCT TGCCCAAAGT TCGTTGCCGG CCGGTATCGG GACGGACTAC ACCTCGTTCA ATGCCACGCT GCCCATCTCA TGGGAAATCG ACGTGTTCGG CCGCGTGCGG CGTCAGACCG AAGCCGCGCG CGCGAACCTG CTCGCCAGCG AGGAAGGGCA GCGGGCCACG CTGCTTACGC TCGTCGCATC GGTTGCCACG TCCTATATCA ATCTGCGCAG TCTCGATCAG CAACTCGAGA TTGCCAGGGC AACCGCGGCC AGCCGCGCCA GTTCCGTGAA GGTCTTCGAA CTGCGCTTCA AGGGCGGGCA GATCTCACAG GTCGAACTGG CCCAGAGTCA GTCGGAATAC GAGGCATCGC TCGCGGATAT TCCCGCCATT GAAGCGCAGA TCGGGCAGCA GGAAGACGCG TTGTCGGTAT TGCTCGGCCG CAACCCCGGT CCCATTCTTC GCGGCCGCAC GCTCGACGAA CTCCAGGCTC CCGGTGTGCC GGCGGGCTTG CCTTCGGAGT TGCTCGCGCG CCGTCCGGAC GTGCTGCAGG CCGAACAGAA CCTGGTTGCC GCCAACGCAT TGATCGGCGC CGCGCGTGCG CTTTATTTTC CACAGATTTC GCTCACGGGA TTGCTCGGCT CGTCGAGCAC GCAGTTAAGC CGGCTCTTTA GCGGCCCGGC GAACACCTGG GCGTTTGCCG GAGCACTGAC GCAACCCATT TTCTCGGCCG GCAACATTGC CGGACAGGTC GAGCAGGCCA AGGCACGCCA GCAACAAGCG CTCTACGCGT ATCAGAAGGC CGTTCAGTCC GCATTCCAGG AAGTCAGCGA CGCACTTCTC GGGGTCGGGA AGTCACGCGA ACGGCTGGCC GCGCAGGAGC GCCAGGTCGA TGCGCTGAGC ACCTACGCAA AACTCGCGCG ACAACGCTAC GAAGGCGGCT ACACGAGCTA CATGGAAGTT CTCGACGCCG AGCGCAGTCT GTTCAGCGCG CAACTGGCTT ATACGCAAAC TCGCGGCAAT GAATACACGT CTCTCGTCAC GCTTTACAAA GCGCTGGGCG GCGGCTGGGG CACGGACGCA CTCGCAGGCT TGGAGCAAGG CGGGACCGGC GCGCAAGCCG AAACACGATA G
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Protein sequence | MRPVGSSFFW VSAVGLCLCL SGCLMGPDYV RPSVETPATF RFSDSTQAQI VDTAWWAQFG DPVLNELIST ALAQNRDLKI AAARVDEFRG QFVTTRSQLF PQISAGFNAG RQRVSPLAQS SLPAGIGTDY TSFNATLPIS WEIDVFGRVR RQTEAARANL LASEEGQRAT LLTLVASVAT SYINLRSLDQ QLEIARATAA SRASSVKVFE LRFKGGQISQ VELAQSQSEY EASLADIPAI EAQIGQQEDA LSVLLGRNPG PILRGRTLDE LQAPGVPAGL PSELLARRPD VLQAEQNLVA ANALIGAARA LYFPQISLTG LLGSSSTQLS RLFSGPANTW AFAGALTQPI FSAGNIAGQV EQAKARQQQA LYAYQKAVQS AFQEVSDALL GVGKSRERLA AQERQVDALS TYAKLARQRY EGGYTSYMEV LDAERSLFSA QLAYTQTRGN EYTSLVTLYK ALGGGWGTDA LAGLEQGGTG AQAETR
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