| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1230 |
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| Symbol | |
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| ID | 4008281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2008813 |
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| End bp | 2012043 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637951456 |
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| Product | RND family hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_554076 |
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| Protein GI | 91778868 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.207904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT CCCATTTCTG TATCGACAGG CCGATCTTCG CGTCGGTCAT CTCCATCGTC
ATCGCGCTTG GCGGCGTGCT GGCCATGTTC GCGTTGCCGG TCGCCCAGTA CCCGGACATC
ACGCCGCCGC AGATCACGAT CACCGCCAGC TACCCGGGCG CGAGCGCCGA CGTGGTGGCG
AATAACGTCG CGGCGCCCAT CGAACAGCAG GTCAACGGCG CGGACAACAT GATCTACATG
ACCTCGTCGA GTTCGTCGAC CGGCAGTCTG ACGATCAACG TGTTCTTCCG CAACGGCACC
AATCCGGATC TGGCCCAGGT GGACGTGCAG AACCGCGTCA ACCTCGCATT GCCGCAACTG
CCGCAGTCCG TGCAGTCGCA GGGCGTGCAG GTACAGAAAA AGTCGTCTGC GTTCATGATG
GTCGTCGCGG TGTACTCACC TGACAACCGG TTCGATTCGA CCTACGTCGC CAACTACGCG
AACGTGTACG TGCTCGATGC GCTCAAACGG ATTCCGGGCG CGAACCAGGC CAGCATCTTC
GGCACGCCGG ACTATGCGAT GCGTATCTGG TTGCGCCCGG ACCGCATGGC GCAGCTCGGC
ATTACGGCTA CCGACGTGCA GAACGCGGTG GCGAACCAGA ATCAGCAGTT CGCGGTGGGG
CGCCTCGGCC AGGCGCCAAC CGGCTCGCCG GTTGAGCAGT CGTTCGCGGT GACGACGAGC
GGGCGTCTTT CGAATCCCGC CGAATTCGAC AACATCATTA TTCGCGCCGC CGGCAACGGC
GCGGCGATCG TCCGTTTGAA AGACATCGGC CGTGCCGAGC TCGGGCAAAA AGACTATTCG
ATACGCAGCC GGTTCCAGGG CAAGCCCGCT ACGGTGATCG CCATCTACCA GCAGCCCGGC
GCCAACGCGC TGGATGTCTC GAAGCAGGTG CGCGCAACGC TGGCGGACAT GAAACGCTCG
TTCCCGGAGG GTATCGATTA CAACATCGCA ATGGATACCA CCGACTTCAC GCGTGCCTCC
ATTGCGGACG TGGTGAAGAC GTTTTTCGAA GCCGTGTTGC TGGTGGTGAT TGTCGTATTC
ATGTTCCTGC AGAGCTTGCG CGCAACGCTG ATTCCGGTGC TGGCGGTGCC GGTCTCCATC
CTGGGGACAT TCATGGGCAT GGCCGCTCTG GGTTTTTCGA TCAACATGCT GACCATGTTC
GGTATGGTGC TGGCAATCGG CATCGTGGTG GACGATGCGA TTGTCGTGAT CGAGAACGTC
GAGCGCAACA TGCGTGAGTT CGGCCTCTCG CCGAACGCGG CGGCCAAGCG GGCTATGGAT
GAAGTGTCGG GCCCGGTCGT CACGATCGTG CTGGTCATGT GCGCGGTGTT CGTGCCGGTT
GCATTTCTGG GCGGCATTAC AGGGCAGATG TACAAGCAGT TTGCCATCAC CATTGCGATT
TCGGTGGTCC TGTCGGGTAT CGTGGCCTTG ACGTTGTCGC CGGCGCTGGC GGCTGTATTG
CTGAAACCGC AGGCGCATGC AAAGCATCGT TTTTTCCAGT GGTTCGATAA CGCCTTCGCG
CGCGTCACGG CGGGGTACGG CCGCGCCGTG ACGCTCACAA TCAGGCGGTT TGGCATCGCG
CTGCTGCTGT TCGCCGGCAT GGTCCTGCTG GCAGTCACGA TGATGCGGTC CATTCCGCAC
GCTTTCCTGC CGCCTGAAGA TCAGGGTTAC CTGCTCGGCG CGATCATCAT GCCCGATTCG
GCGAGTCTCG ATCGTACGGG CCGGGTGTCG TCGCGCGTGA CCGAGTACTT CGGCAAGCAG
GCCGGCGTAG GCAGCATAAC GGTGGTCGAC GGTTACAGCC TGCTCGACAA TCAGACAATG
AACAACGCCG CAACGTTCTT TGTCGGACTG AAGGGATTCG ACGAGCGGTA TTCATGGGCG
AACATTCGCA CGCAAAATGC GCATGCATTG CTGCTTGGCG CCTACCGGGC ACTGTCGCGG
ATCAAGGAAG GCATTGTCGT ACCGGTCAAC CCGCCGTCCA TCCCCGGGCT TGGCACGACG
GGCGGCACCG AGATGTGGAT TCAGAGCAAA GGCGACGGCA CCACGGCACA ACTTGCGCAG
GTCGTGCAGG ACTTTATTGC CAAGGCGAAG GCGCGGCCCG AACTGGCGGG CGTCACGTCG
ACCTTCAATG CTTCTTCACA GCAGTTGCGT GTCGATGTCG ATCGCGACAG GGCGGCCACA
CTCGGCGTGC CGATCGACGA GGTCTACAGC ACGATGCAGA CCATGTTCGG CTCGCTGTAC
GTGTCACAGT TCAACCAGTC GAGCCGTCTG TGGCAGGTGA TCCTTCAGGC CGAGCCGTCG
TACCGGTTAA AGCCCACGGA CCTCGAACAG GTATTCGTGC GCAGCGCCAC GGGCACGATG
GTGCCGCTCA AATCGGTCGT GACCTATCAG TACGTAACCG GCCCGTCCCT GATGACGCGC
TTCAACGATT TTCCGGCCGT GCTGATTACC GCGAACGCGG CACCGGGCCA TAGTTCGGGC
GAAGTCATCG CCGTGCTGGA GGAGCTGGCG CGAACCATGC CCGCGGGATA TGGCGCGGGG
TGGAGCGGAG AAGCGTACGA AGCCCGTCAG TCAGGTAACA CGTCCGGCCT CGTTTTCGTG
TTCGGTCTGG TGATGGTGTT CCTGATTCTC GCCGCGCAAT ACGAACGCTG GAGCCTGCCG
GTCGGCGTTC TGATGGCCGT GCCGTTTGCA CTGTTCGGCG CTTTGCTGGC GATCCTGTTG
AGAGGCCTGA ACAACGACGT CTATTTTCAG ATCGGTCTCA CCATGCTGGT CGCACTCGCG
GCGAAAAATG CGATTCTCAT TTTCGAGTTT GCGGTGTTGA ATCGCGCACA AGGCGCATCC
CCGTTCGACG CTGCGTTGAC CGCCGCGCGG GACCGGTTGC GGCCAATCGT CATGACGTCG
TTCGCCTTTA TTCTCGGCTG CGTTCCGCTG GCCATCGCAA CCGGCGCGTC GCAGAACAGC
CGGCATTCCA TCGGCACCGG GGTGATCGGC GGCATGTTGG GGGCAACCGG CGTCGCCGTC
TTCTTCATTC CAATGTTCTT CTTCCTGCTC GAATCGGCGA ACGAGCGGCG CGCCGGCAAG
AAGAACGGAG ATGCCGTGCC AAAGGAGCAA GGTGAACCGG CGCTGTCCGG TTCGCGCTCA
GTGACTAACA GTTCGACCGG TATGCATCCC GGCACGAAGC GGGATAATTG A
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| Protein sequence | MKLSHFCIDR PIFASVISIV IALGGVLAMF ALPVAQYPDI TPPQITITAS YPGASADVVA
NNVAAPIEQQ VNGADNMIYM TSSSSSTGSL TINVFFRNGT NPDLAQVDVQ NRVNLALPQL
PQSVQSQGVQ VQKKSSAFMM VVAVYSPDNR FDSTYVANYA NVYVLDALKR IPGANQASIF
GTPDYAMRIW LRPDRMAQLG ITATDVQNAV ANQNQQFAVG RLGQAPTGSP VEQSFAVTTS
GRLSNPAEFD NIIIRAAGNG AAIVRLKDIG RAELGQKDYS IRSRFQGKPA TVIAIYQQPG
ANALDVSKQV RATLADMKRS FPEGIDYNIA MDTTDFTRAS IADVVKTFFE AVLLVVIVVF
MFLQSLRATL IPVLAVPVSI LGTFMGMAAL GFSINMLTMF GMVLAIGIVV DDAIVVIENV
ERNMREFGLS PNAAAKRAMD EVSGPVVTIV LVMCAVFVPV AFLGGITGQM YKQFAITIAI
SVVLSGIVAL TLSPALAAVL LKPQAHAKHR FFQWFDNAFA RVTAGYGRAV TLTIRRFGIA
LLLFAGMVLL AVTMMRSIPH AFLPPEDQGY LLGAIIMPDS ASLDRTGRVS SRVTEYFGKQ
AGVGSITVVD GYSLLDNQTM NNAATFFVGL KGFDERYSWA NIRTQNAHAL LLGAYRALSR
IKEGIVVPVN PPSIPGLGTT GGTEMWIQSK GDGTTAQLAQ VVQDFIAKAK ARPELAGVTS
TFNASSQQLR VDVDRDRAAT LGVPIDEVYS TMQTMFGSLY VSQFNQSSRL WQVILQAEPS
YRLKPTDLEQ VFVRSATGTM VPLKSVVTYQ YVTGPSLMTR FNDFPAVLIT ANAAPGHSSG
EVIAVLEELA RTMPAGYGAG WSGEAYEARQ SGNTSGLVFV FGLVMVFLIL AAQYERWSLP
VGVLMAVPFA LFGALLAILL RGLNNDVYFQ IGLTMLVALA AKNAILIFEF AVLNRAQGAS
PFDAALTAAR DRLRPIVMTS FAFILGCVPL AIATGASQNS RHSIGTGVIG GMLGATGVAV
FFIPMFFFLL ESANERRAGK KNGDAVPKEQ GEPALSGSRS VTNSSTGMHP GTKRDN
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