| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1212 |
|---|
| Symbol | |
|---|
| ID | 4008299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2033966 |
|---|
| End bp | 2034982 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637951474 |
|---|
| Product | 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| Protein accession | YP_554094 |
|---|
| Protein GI | 91778886 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.0968144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.291896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGC AACGATTTCC TCGTTACCCG CTGACTTTCG GGCCGACGCC GATCCAACCG
CTAGCGCGTC TGAGCAAGCA TCTCGGCGGC AAAGTGCATC TGTATGCGAA ACGCGAGGAC
TGCAACAGCG GTCTTGCCTT CGGCGGCAAC AAGACACGCA AACTCGAATA TCTGATCCCT
GAAGTGCTTG CGCAGGGTTG CGACACGCTC GTGTCGATCG GCGGCATCCA GTCGAACCAG
ACGCGCCAGG TGGCGGCCGT GGCAGCGCAT CTGGGCATGA AATGCGTGCT GGTACAGGAG
AACTGGGTCA ACTACTCGGA CGCGGTCTAC GACCGGGTCG GCAACATCCA GATGTCGCGT
ATTCTCGGCG CCGATGTGCG CCTCGTGCCC GACGGCTTCG ACATCGGCTT TCGCAAGAGC
TGGGAGGAGG CGCTCGAAAG CGTGCGCGCC GCCGGCGGCA AACCGTATGC GATTCCGGCC
GGCTGCTCGG ACCATCCGCT CGGCGGCCTC GGTTTCGTCG GCTTCGCGGA AGAGGTGCGT
CAGCAGGAAG CCGAATTGGG CTTCAAGTTC GACTACGTCG TGGTGTGTTC CGTAACCGGC
AGCACGCAAG CCGGCATGGT GGTGGGTTTT GCCGCCGACG GCCGCGCTGA TCGCGTGATC
GGCATCGACG CATCGGCAAA GCCCGCGCAG ACGCGCGAGC AGATCACGCG AATCGCCCGG
CAAACGGCGG AAAAAGTCGG CCTGGGCCGC GATATCACGA GCGAAGACGT GGTGCTCGAC
GAGCGCTTCG CCGGTCCGGA ATACGGCCTG CCGAATGACG GCACGCTGGA AGCAATCCGC
TTGTGCGCCC GCATGGAGGG CGTGCTGACC GATCCCGTCT ACGAAGGCAA ATCCATGCAC
GGCATGATCG AGATGGTGCG CAACGGCGAA TTTCCGGAAG GTTCGCGCGT GCTGTATGCG
CACCTCGGCG GCGTGCCGGC GTTGAACGGC TACAGCTTCA TTTTCCGCAA CGGCTAA
|
|---|
| Protein sequence | MNLQRFPRYP LTFGPTPIQP LARLSKHLGG KVHLYAKRED CNSGLAFGGN KTRKLEYLIP
EVLAQGCDTL VSIGGIQSNQ TRQVAAVAAH LGMKCVLVQE NWVNYSDAVY DRVGNIQMSR
ILGADVRLVP DGFDIGFRKS WEEALESVRA AGGKPYAIPA GCSDHPLGGL GFVGFAEEVR
QQEAELGFKF DYVVVCSVTG STQAGMVVGF AADGRADRVI GIDASAKPAQ TREQITRIAR
QTAEKVGLGR DITSEDVVLD ERFAGPEYGL PNDGTLEAIR LCARMEGVLT DPVYEGKSMH
GMIEMVRNGE FPEGSRVLYA HLGGVPALNG YSFIFRNG
|
|---|
| |