| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1188 |
|---|
| Symbol | |
|---|
| ID | 4008323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2059998 |
|---|
| End bp | 2061440 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637951498 |
|---|
| Product | putative nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_554118 |
|---|
| Protein GI | 91778910 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.59249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG AGTCCAACGG TCTCAACGAT ATCGCGTCGA TCCTCTCCAA TCCGATTCTC
AACACGGATT CGTACAAAGC GTCGCACTAT CTGCAATATC CGCCCGAAGC ATCGGCGATG
TTCTCGTACA TCGAATCGCG CGGCGGGCGC TACGATCGCA CGCTGTTCTT CGGCTTGCAG
ATGCTGATCA AGGAGTATCT GTGCCGTCCG GTCACGCCGG CCATGATCGG GCAGGCCAAA
GCATTTTTCA CGGCGCACGG CGAGCCGTTC AACGAAGCCG GCTGGCGCCA CGTCGTCGAG
CAGTACGGCG GCTATCTGCC GGTGCGCATT CGCGCGGTGC CGGAAGGCTC GGTCGTGCCG
ACGCACAACG TGCTGGTCAC GGTCGAATGC GACGATCCGC AGGTGTTCTG GCTGGCTTCG
TATCTGGAAA CCATGTTGCT GCGCGTGTGG TATCCGATTA CGGTGGCGAC GCAAAGCTGG
CATCTACGCA AGACGATCCG CGGCTATCTG CTGAAGAGCA GTGACGACCT CGCGCAATTG
CCGTTCAAGC TGCATGACTT CGGCGCGCGC GGAGTGTCGA GCGCGGAGTC GGCGGCGATC
GGCGGCGCGG CGCACCTCGT CAGTTTCATG GGCTCGGATA CCGTGCTCGG CGTGGTCGCG
GCGAACCACT ACTACAACGA AACGATGGCG GCGTTTTCCG TGCCGGCAGC GGAGCACAGC
ACGATCACCT CATGGGGCCG CGAGCGCGAA ACCGACGCGT TCCGCAACAT GATTGCGCAG
TTCGGCAAGC CTGGCGCGAT CGTCTCAGTG GTGTCCGATT CCTACGATCT GTTCGCCGCG
CTCCGCGTCT GGGGCACGGA GTTGAAACAG GCGGTGCTCG ATTCCGGCGG CATGCTCGTG
ATCCGGCCCG ACTCCGGCGA TCCGCGGACG ATAGTACTGC AAACCATGCG GGCGCTGGAG
GCGTCGTTCG GATCGGCGGT GAACGGCAAA GGGCGGCGCG TGCTCAACAA CGTGCGCGTG
ATCCAGGGTG ACGGCGTGAA TCCCGATTCG ATCGAAGCGA TCCTCGCCGC TCTGGACCAG
GCCGGTTTCG CGGCGGATAA CATCGTGTTC GGCATGGGCG GCGCGCTGTT GCAGCAGATC
AACCGCGACA CGCAGCGCTT CGCGATGAAA TGCTCGGCGA TCCGTTTAGG CGACGAGTGG
CACGACGTGC TCAAAGACCC GATTACGGAC ACCGCAAAGC GCTCGATGAA AGGGCGGCTG
ACGTTGCTGG TGAACCGGCA CACCGGCGAG TATCGAACCA CCACGCTGCC CGTTGCGTGG
AACGCACACA TGGTCGAGGG TGATTGGGAA GAGGCGCTGG TGACGGTCTT CGATTCCGGC
AAGCTGCTGG TGGATGTATC GCTGGCGGAG ATCAGGCGCC GCGCTCACGC GCACGAAGCC
TGA
|
|---|
| Protein sequence | MQNESNGLND IASILSNPIL NTDSYKASHY LQYPPEASAM FSYIESRGGR YDRTLFFGLQ
MLIKEYLCRP VTPAMIGQAK AFFTAHGEPF NEAGWRHVVE QYGGYLPVRI RAVPEGSVVP
THNVLVTVEC DDPQVFWLAS YLETMLLRVW YPITVATQSW HLRKTIRGYL LKSSDDLAQL
PFKLHDFGAR GVSSAESAAI GGAAHLVSFM GSDTVLGVVA ANHYYNETMA AFSVPAAEHS
TITSWGRERE TDAFRNMIAQ FGKPGAIVSV VSDSYDLFAA LRVWGTELKQ AVLDSGGMLV
IRPDSGDPRT IVLQTMRALE ASFGSAVNGK GRRVLNNVRV IQGDGVNPDS IEAILAALDQ
AGFAADNIVF GMGGALLQQI NRDTQRFAMK CSAIRLGDEW HDVLKDPITD TAKRSMKGRL
TLLVNRHTGE YRTTTLPVAW NAHMVEGDWE EALVTVFDSG KLLVDVSLAE IRRRAHAHEA
|
|---|
| |