Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1140 |
Symbol | |
ID | 4008371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2113746 |
End bp | 2114600 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951546 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_554166 |
Protein GI | 91778958 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.545053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACA GTTTCGACCA GCTCGCCGCC CTGATTCGGG CGCGCTTCTC AGAACTGAGT CCGCAGTTCC AGATGGGGGC GGCCTTCCTG CTCGATCATC CCGACGAGGT CGCGGTCTCA TCCATGCGCA AGGTGGCCGA ACGGGCGCAG GTGCAACCGG CCTCACTGGT GCGCCTGTCG CAGCAACTCG GTTTCCCTGG CTGGAACGAG TTGCGCAACC TCTTCGTCGC GCGCGTTCGC ACGCGGCCCG AACCGCTCGC GAGCCGCGCC CGTTCGCTCG TCAAATCGAA AGACGCGCTG GCGAACGACC TGCTGGTCGC GCAACAGCAC AATCTCGAGG TGACCGCCGC GCATAACGGC CGCGTGATCG TGGAGGCGGC GCGTCTGTTG CGGCGCGCGC CGCACGTCCA TGTGGCCGGT TTCCGCTCCT GTTACGCGGT GGCGTTCGGT CTCGTCTACG GATACCGGCT GTTCCGTTCC TCTGTGTCCT TGCTCAACGG CGAGGCCGGT ACGCTGGAGA TGCAGTTGCG CACCGTCGAG CGCGACAGCG CGACCATCGT GATCAGTTTC GCGCCGTATT CGGTGGAAGC CGTACGCGTG GCCGAAGCCG CGCTGGAAAA GGGCAGTAAG CTGATCGCGA TCACCGACAG CGCCGTGTCG CCGATCGCCT TGAATGCCGA CAAGGTACTG ATCTTTTCGC ACGAAAGTCC TTCGTTTTTC CCTTCGCTGG TGGCGGCGAC GGCAATCACC GAGTCGCTGG TCGCGCATCT GCTGGCGCTC GAGGGAGCGG GCGCGGTCGA GCAGCTCGCC ATTGCGGAAC AGTCGCTGCA TGCAAAAGGC GCGTACGTGC CTTGA
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Protein sequence | MPDSFDQLAA LIRARFSELS PQFQMGAAFL LDHPDEVAVS SMRKVAERAQ VQPASLVRLS QQLGFPGWNE LRNLFVARVR TRPEPLASRA RSLVKSKDAL ANDLLVAQQH NLEVTAAHNG RVIVEAARLL RRAPHVHVAG FRSCYAVAFG LVYGYRLFRS SVSLLNGEAG TLEMQLRTVE RDSATIVISF APYSVEAVRV AEAALEKGSK LIAITDSAVS PIALNADKVL IFSHESPSFF PSLVAATAIT ESLVAHLLAL EGAGAVEQLA IAEQSLHAKG AYVP
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